PlantSME Plant secondary metabolism enzyme database

Ptychomnion cygnisetum (ptychomnion_cygnisetum)

Imported from atlas release summary for Ptychomnion cygnisetum.

596
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 156 11 POD (81) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 129 18 NMT (25) View species results
Flavonoid pathway 79 10 UFGT (25) View species results
Rosmarinic acid pathway 52 7 C4H (23) View species results
Steroid pathway 39 13 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 636 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 110 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Pcyg2846250156890 Phenylpropanoid CAD medium borderline
Pcyg2876210179470 Phenylpropanoid CAD medium pass
Pcyg2880990181010 Phenylpropanoid CAD medium pass
Pcyg2897200189890 Phenylpropanoid CAD low borderline
Pcyg2903250193130 Phenylpropanoid CAD low borderline
Pcyg2921630206790 Phenylpropanoid CAD medium pass
Pcyg2922610207600 Phenylpropanoid CAD medium pass
Pcyg2927090210830 Phenylpropanoid CAD low borderline
Pcyg2927870211510 Phenylpropanoid CAD low borderline
Pcyg2949680224080 Phenylpropanoid CAD low borderline
Pcyg2958280227160 Phenylpropanoid CAD low borderline
Pcyg2383780053460 Phenylpropanoid CCR medium borderline
Pcyg2513600077240 Phenylpropanoid CCR medium borderline
Pcyg2902650191340 Phenylpropanoid CCR medium borderline
Pcyg2917980203520 Phenylpropanoid CCR low borderline
Pcyg2143550025570 Phenylpropanoid CCoAOMT medium pass
Pcyg2382540052350 Phenylpropanoid CCoAOMT low borderline
Pcyg2893280187550 Phenylpropanoid CCoAOMT medium pass
Pcyg1834610002850 Phenylpropanoid COMT low borderline
Pcyg1894070010400 Phenylpropanoid COMT low borderline
Pcyg1894090010430 Phenylpropanoid COMT medium pass
Pcyg2173290029930 Phenylpropanoid COMT medium pass
Pcyg2208260041690 Phenylpropanoid COMT medium pass
Pcyg2382660052460 Phenylpropanoid COMT medium pass
Pcyg2513710077790 Phenylpropanoid COMT medium pass
Pcyg2513710077800 Phenylpropanoid COMT medium pass
Pcyg2682490099870 Phenylpropanoid COMT low borderline
Pcyg2711930105090 Phenylpropanoid COMT medium pass
Pcyg2767990114200 Phenylpropanoid COMT medium pass
Pcyg2863350165710 Phenylpropanoid COMT medium pass
Pcyg2867190171170 Phenylpropanoid COMT low borderline
Pcyg2896500189520 Phenylpropanoid COMT medium pass
Pcyg2902720191780 Phenylpropanoid COMT medium pass
Pcyg1893920010090 Phenylpropanoid CSE medium pass
Pcyg1895810011780 Phenylpropanoid CSE medium pass
Pcyg2173780031120 Phenylpropanoid CSE medium pass
Pcyg2176000033610 Phenylpropanoid CSE low borderline
Pcyg2208260041730 Phenylpropanoid CSE medium pass
Pcyg2375610049610 Phenylpropanoid CSE medium pass
Pcyg2644010083960 Phenylpropanoid CSE medium pass
Pcyg2645130084490 Phenylpropanoid CSE low borderline
Pcyg2707850103390 Phenylpropanoid CSE low borderline
Pcyg2778890125690 Phenylpropanoid CSE medium pass
Pcyg2780450127590 Phenylpropanoid CSE medium pass
Pcyg2906570197930 Phenylpropanoid CSE low borderline
Pcyg2925300208620 Phenylpropanoid CSE medium pass
Pcyg2386020055970 Phenylpropanoid F5H/CYP84A medium borderline
Pcyg2679420096600 Phenylpropanoid F5H/CYP84A medium borderline
Pcyg2780450127680 Phenylpropanoid F5H/CYP84A medium borderline
Pcyg2881230181100 Phenylpropanoid F5H/CYP84A medium borderline