PlantSME Plant secondary metabolism enzyme database

Ptychomnion cygnisetum (ptychomnion_cygnisetum)

Imported from atlas release summary for Ptychomnion cygnisetum.

596
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 156 11 POD (81) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 129 18 NMT (25) View species results
Flavonoid pathway 79 10 UFGT (25) View species results
Rosmarinic acid pathway 52 7 C4H (23) View species results
Steroid pathway 39 13 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 636 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 110 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Pcyg2903510193720 Phenylpropanoid F5H/CYP84A medium borderline
Pcyg1893470009490 Phenylpropanoid HCT low borderline
Pcyg2119020024800 Phenylpropanoid HCT low borderline
Pcyg2387100059260 Phenylpropanoid HCT medium pass
Pcyg2453260063890 Phenylpropanoid HCT low borderline
Pcyg2453260063930 Phenylpropanoid HCT medium pass
Pcyg2467670067910 Phenylpropanoid HCT medium pass
Pcyg2709500103940 Phenylpropanoid HCT medium pass
Pcyg2771690121740 Phenylpropanoid HCT low borderline
Pcyg2839820153680 Phenylpropanoid HCT low borderline
Pcyg2905470196720 Phenylpropanoid HCT medium pass
Pcyg2919200204870 Phenylpropanoid HCT low borderline
Pcyg2176000033600 Phenylpropanoid LAC medium pass
Pcyg2680140097660 Phenylpropanoid LAC medium pass
Pcyg2711240104790 Phenylpropanoid LAC medium pass
Pcyg2718120108210 Phenylpropanoid LAC medium pass
Pcyg2780530127920 Phenylpropanoid LAC low borderline
Pcyg2853460160720 Phenylpropanoid LAC low borderline
Pcyg2864460168210 Phenylpropanoid LAC low borderline
Pcyg2908340198740 Phenylpropanoid LAC medium pass
Pcyg2908850200450 Phenylpropanoid LAC low borderline
Pcyg2937720217020 Phenylpropanoid LAC medium pass
Pcyg2962110228360 Phenylpropanoid LAC medium pass
Pcyg1915120018080 Phenylpropanoid PAL high pass
Pcyg2162410027890 Phenylpropanoid PAL high pass
Pcyg2184600037450 Phenylpropanoid PAL high pass
Pcyg2184600037470 Phenylpropanoid PAL high pass
Pcyg2681490099250 Phenylpropanoid PAL high pass
Pcyg2778990125950 Phenylpropanoid PAL high pass
Pcyg2936240216100 Phenylpropanoid PAL high pass
Pcyg3082750233500 Phenylpropanoid PAL high pass
Pcyg1765390000490 Phenylpropanoid POD medium pass
Pcyg1834660002880 Phenylpropanoid POD medium pass
Pcyg1835520003250 Phenylpropanoid POD medium pass
Pcyg1860250005540 Phenylpropanoid POD medium pass
Pcyg1895110011360 Phenylpropanoid POD medium pass
Pcyg1898080013120 Phenylpropanoid POD medium pass
Pcyg1900090014540 Phenylpropanoid POD medium pass
Pcyg1908020016450 Phenylpropanoid POD medium pass
Pcyg1913390017480 Phenylpropanoid POD medium pass
Pcyg1928650020480 Phenylpropanoid POD low borderline
Pcyg2144260025660 Phenylpropanoid POD medium pass
Pcyg2173670030870 Phenylpropanoid POD medium pass
Pcyg2178040035550 Phenylpropanoid POD medium pass
Pcyg2178040035560 Phenylpropanoid POD medium pass
Pcyg2179940036440 Phenylpropanoid POD medium pass
Pcyg2201420039460 Phenylpropanoid POD medium pass
Pcyg2201420039470 Phenylpropanoid POD medium pass
Pcyg2201420039480 Phenylpropanoid POD medium pass
Pcyg2208260041710 Phenylpropanoid POD medium pass