PlantSME Plant secondary metabolism enzyme database

Ptychomnion cygnisetum (ptychomnion_cygnisetum)

Imported from atlas release summary for Ptychomnion cygnisetum.

596
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 156 11 POD (81) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 129 18 NMT (25) View species results
Flavonoid pathway 79 10 UFGT (25) View species results
Rosmarinic acid pathway 52 7 C4H (23) View species results
Steroid pathway 39 13 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 636 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 110 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Pcyg2516700078770 Alkaloid NMT medium borderline
Pcyg2523890080180 Alkaloid NMT medium pass
Pcyg2658420090710 Alkaloid NMT medium pass
Pcyg2664480094910 Alkaloid NMT medium pass
Pcyg2679600097010 Alkaloid NMT medium borderline
Pcyg2681520099280 Alkaloid NMT medium pass
Pcyg2681970099680 Alkaloid NMT low borderline
Pcyg2715620107050 Alkaloid NMT medium pass
Pcyg2715620107060 Alkaloid NMT medium pass
Pcyg2763940109990 Alkaloid NMT medium pass
Pcyg2767700113210 Alkaloid NMT low borderline
Pcyg2767900113970 Alkaloid NMT low borderline
Pcyg2767990114200 Alkaloid NMT medium borderline
Pcyg2768590115300 Alkaloid NMT medium pass
Pcyg2769120116180 Alkaloid NMT medium pass
Pcyg2769630117040 Alkaloid NMT low borderline
Pcyg2770050117540 Alkaloid NMT low borderline
Pcyg2779570126890 Alkaloid NMT medium pass
Pcyg2782260129590 Alkaloid NMT medium pass
Pcyg2789810136090 Alkaloid NMT low borderline
Pcyg2790480138150 Alkaloid NMT medium borderline
Pcyg2833730146870 Alkaloid NMT medium pass
Pcyg2838220150920 Alkaloid NMT medium borderline
Pcyg2838350151920 Alkaloid NMT medium pass
Pcyg2839820153630 Alkaloid NMT low borderline
Pcyg2846030156420 Alkaloid NMT medium pass
Pcyg2862240163230 Alkaloid NMT medium pass
Pcyg2867060171040 Alkaloid NMT medium pass
Pcyg2870810173210 Alkaloid NMT low borderline
Pcyg2871390174040 Alkaloid NMT low borderline
Pcyg2871960175540 Alkaloid NMT low borderline
Pcyg2890720184380 Alkaloid NMT medium pass
Pcyg2892220186550 Alkaloid NMT medium pass
Pcyg2896040189140 Alkaloid NMT medium pass
Pcyg2897850190020 Alkaloid NMT medium pass
Pcyg2902880192290 Alkaloid NMT low borderline
Pcyg2909040200760 Alkaloid NMT low borderline
Pcyg2925300208610 Alkaloid NMT low borderline
Pcyg2927720211430 Alkaloid NMT medium pass
Pcyg2935640215580 Alkaloid NMT low borderline
Pcyg2951320224680 Alkaloid NMT medium pass
Pcyg2985540232670 Alkaloid NMT low borderline
Pcyg2988300233200 Alkaloid NMT low borderline
Pcyg2528930081410 Alkaloid ODC low borderline
Pcyg2919700205570 Alkaloid ODC medium pass
Pcyg2119020024830 Alkaloid PMT medium pass
Pcyg2177200034880 Alkaloid PMT low borderline
Pcyg2387100059260 Alkaloid PMT low borderline
Pcyg2453260063930 Alkaloid PMT medium pass
Pcyg2467670067910 Alkaloid PMT medium pass