PlantSME Plant secondary metabolism enzyme database

Ptychomnion cygnisetum (ptychomnion_cygnisetum)

Imported from atlas release summary for Ptychomnion cygnisetum.

596
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 156 11 POD (81) View species results
Terpenoid pathway 141 19 BAHD (61) View species results
Alkaloid pathway 129 18 NMT (25) View species results
Flavonoid pathway 79 10 UFGT (25) View species results
Rosmarinic acid pathway 52 7 C4H (23) View species results
Steroid pathway 39 13 CAS (11) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 636 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 110 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Pcyg2653900086930 Alkaloid PMT medium borderline
Pcyg2839820153680 Alkaloid PMT low borderline
Pcyg1915120018070 Alkaloid PYKS high pass
Pcyg1915120018100 Alkaloid PYKS medium pass
Pcyg2155520025820 Alkaloid PYKS high pass
Pcyg2201420039590 Alkaloid PYKS high pass
Pcyg2201420039600 Alkaloid PYKS high pass
Pcyg2387810060790 Alkaloid PYKS low borderline
Pcyg2394840062290 Alkaloid PYKS low borderline
Pcyg2453830064930 Alkaloid PYKS high pass
Pcyg2511980076280 Alkaloid PYKS high pass
Pcyg2655520088050 Alkaloid PYKS low borderline
Pcyg2660580091680 Alkaloid PYKS low borderline
Pcyg2664340094470 Alkaloid PYKS high pass
Pcyg2681490099220 Alkaloid PYKS medium pass
Pcyg2681490099240 Alkaloid PYKS high pass
Pcyg2706750102100 Alkaloid PYKS medium pass
Pcyg2778990125960 Alkaloid PYKS medium pass
Pcyg2792450140360 Alkaloid PYKS low borderline
Pcyg2834760147560 Alkaloid PYKS high pass
Pcyg2872160176760 Alkaloid PYKS low borderline
Pcyg2890220183640 Alkaloid PYKS low borderline
Pcyg2905810197120 Alkaloid PYKS low borderline
Pcyg2909240201230 Alkaloid PYKS high pass
Pcyg2919200204940 Alkaloid PYKS low borderline
Pcyg2936240216110 Alkaloid PYKS high pass
Pcyg2960890227990 Alkaloid PYKS medium pass
Pcyg2962130228420 Alkaloid PYKS medium pass
Pcyg3082750233510 Alkaloid PYKS high pass
Pcyg1873490006930 Alkaloid SGD medium pass
Pcyg1914180017630 Alkaloid SGD low borderline
Pcyg2215970041870 Alkaloid SGD medium pass
Pcyg2391170061790 Alkaloid SGD medium pass
Pcyg2453180063620 Alkaloid SGD medium pass
Pcyg2791840139600 Alkaloid SGD low borderline
Pcyg2846960157800 Alkaloid SGD medium pass
Pcyg2892080186410 Alkaloid SGD low borderline
Pcyg2946320222080 Alkaloid SGD medium pass
Pcyg1892930008420 Alkaloid SLS medium borderline
Pcyg1905780016160 Alkaloid SLS medium borderline
Pcyg1921900019250 Alkaloid SLS medium borderline
Pcyg2390560061710 Alkaloid SLS medium borderline
Pcyg2655730088740 Alkaloid SLS medium borderline
Pcyg2925640209200 Alkaloid SLS medium borderline
Pcyg2929320212960 Alkaloid SLS medium borderline
Pcyg2938250217430 Alkaloid SLS medium borderline
Pcyg2963950229280 Alkaloid SLS medium borderline
Pcyg1761010000170 Alkaloid STR low borderline
Pcyg1836440003440 Alkaloid STR low borderline
Pcyg1865980006240 Alkaloid STR medium pass