Ptychomnion cygnisetum (ptychomnion_cygnisetum)
Imported from atlas release summary for Ptychomnion cygnisetum.
873
Candidate Protein Records
596
Pathway-Level Records
1629
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Algae
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
1629
Family-Level Calls
C4H
7.55%
C3'H/CYP98A
6.02%
BAHD
5.59%
POD
5.22%
4CL
4.6%
CYP76
4.3%
NMT
3.74%
GS
3.19%
Other Families
59.79%
More Families (96)
IFS
49
3.01%
T3O
46
2.82%
F3'H/CYP75B
42
2.58%
BR6OX2/CYP85A2
38
2.33%
DWF4/CYP90B1
37
2.27%
IFR
34
2.09%
STR
33
2.03%
F3H
31
1.9%
UGT
29
1.78%
UFGT
28
1.72%
7DLGT
27
1.66%
PYKS
27
1.66%
CAD
26
1.6%
PAL
24
1.47%
TRI/TRII
23
1.41%
CODM/T6ODM
23
1.41%
SMT1/SMT2/SMT3
23
1.41%
IO
22
1.35%
CHS
22
1.35%
COMT
15
0.92%
CYP71
15
0.92%
7DLH
14
0.86%
CSE
13
0.8%
CAS
12
0.74%
CYP90D1
12
0.74%
HCT
11
0.68%
LAC
11
0.68%
NCS
10
0.61%
H6H
10
0.61%
G8O/G8H
9
0.55%
SGD
9
0.55%
SLS
9
0.55%
16OMT
9
0.55%
CNMT
9
0.55%
F3'5'H/CYP75A
9
0.55%
8HGO
8
0.49%
RAS
8
0.49%
CPD/CYP90A1
8
0.49%
T16H
7
0.43%
BBE
7
0.43%
PMT
7
0.43%
ANR
7
0.43%
FNS
7
0.43%
CPR
7
0.43%
DFR
6
0.37%
CYP51G1
6
0.37%
COR
5
0.31%
LAMT
5
0.31%
F5H/CYP84A
5
0.31%
TDC
4
0.25%
CYP719
4
0.25%
MPO
4
0.25%
CYP80F1
4
0.25%
CHI
4
0.25%
CCR
4
0.25%
TAT
4
0.25%
BR6OX1/CYP85A1
4
0.25%
DET2
4
0.25%
SQS/FDFT1
4
0.25%
SMO1/SMO2
4
0.25%
SQE
4
0.25%
DWF5
4
0.25%
GGPPS
4
0.25%
TYDC_DDC
3
0.18%
GES
3
0.18%
ANS/LDOX
3
0.18%
CCoAOMT
3
0.18%
HYD1
3
0.18%
DWF1
3
0.18%
ROT3/CYP90C1
3
0.18%
AACT
3
0.18%
MVK
3
0.18%
6OMT_4OMT_SOMT
2
0.12%
CYP80B1
2
0.12%
ODC
2
0.12%
ADC
2
0.12%
HPPR
2
0.12%
HDR/IspH
2
0.12%
HMGR
2
0.12%
MCT/IspD
2
0.12%
CMK/IspE
2
0.12%
FPPS
2
0.12%
TPS
2
0.12%
MVD
2
0.12%
DXR
2
0.12%
ISY
1
0.06%
FLS
1
0.06%
CPI1
1
0.06%
FK
1
0.06%
DWF7
1
0.06%
MDS/IspF
1
0.06%
PMK
1
0.06%
HDS/IspG
1
0.06%
HMGS
1
0.06%
DXS
1
0.06%
IDI
1
0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 156 | 11 | POD (81) | View species results |
| Terpenoid pathway | 141 | 19 | BAHD (61) | View species results |
| Alkaloid pathway | 129 | 18 | NMT (25) | View species results |
| Flavonoid pathway | 79 | 10 | UFGT (25) | View species results |
| Rosmarinic acid pathway | 52 | 7 | C4H (23) | View species results |
| Steroid pathway | 39 | 13 | CAS (11) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 636 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 110 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Pcyg1893870009950 | Alkaloid | STR | low | borderline |
| Pcyg1893960010150 | Alkaloid | STR | low | borderline |
| Pcyg2155520025830 | Alkaloid | STR | low | borderline |
| Pcyg2198690038550 | Alkaloid | STR | low | borderline |
| Pcyg2386640057860 | Alkaloid | STR | low | borderline |
| Pcyg2445690062790 | Alkaloid | STR | low | borderline |
| Pcyg2510510070370 | Alkaloid | STR | low | borderline |
| Pcyg2655180087640 | Alkaloid | STR | medium | pass |
| Pcyg2655520088110 | Alkaloid | STR | low | borderline |
| Pcyg2655600088390 | Alkaloid | STR | low | borderline |
| Pcyg2656120089140 | Alkaloid | STR | low | borderline |
| Pcyg2656120089170 | Alkaloid | STR | low | borderline |
| Pcyg2767540112500 | Alkaloid | STR | low | borderline |
| Pcyg2767670113120 | Alkaloid | STR | medium | pass |
| Pcyg2768360114960 | Alkaloid | STR | low | borderline |
| Pcyg2769570116910 | Alkaloid | STR | low | borderline |
| Pcyg2775750125430 | Alkaloid | STR | medium | pass |
| Pcyg2779620127140 | Alkaloid | STR | low | borderline |
| Pcyg2781760129130 | Alkaloid | STR | medium | pass |
| Pcyg2789280133900 | Alkaloid | STR | low | borderline |
| Pcyg2846270157110 | Alkaloid | STR | low | borderline |
| Pcyg2872320176990 | Alkaloid | STR | medium | pass |
| Pcyg2890720184420 | Alkaloid | STR | medium | pass |
| Pcyg2905160196150 | Alkaloid | STR | low | borderline |
| Pcyg2905180196440 | Alkaloid | STR | low | borderline |
| Pcyg2910620201640 | Alkaloid | STR | low | borderline |
| Pcyg2918460204000 | Alkaloid | STR | low | borderline |
| Pcyg2925620208990 | Alkaloid | STR | low | borderline |
| Pcyg2929020212110 | Alkaloid | STR | low | borderline |
| Pcyg2962150228440 | Alkaloid | STR | medium | pass |
| Pcyg1893620009820 | Alkaloid | T16H | medium | borderline |
| Pcyg1924300019550 | Alkaloid | T16H | medium | borderline |
| Pcyg2511240073000 | Alkaloid | T16H | medium | borderline |
| Pcyg2660010091260 | Alkaloid | T16H | medium | borderline |
| Pcyg2679420096600 | Alkaloid | T16H | medium | borderline |
| Pcyg2709950104320 | Alkaloid | T16H | medium | borderline |
| Pcyg2715790107290 | Alkaloid | T16H | medium | borderline |
| Pcyg1834390002790 | Alkaloid | T3O | medium | borderline |
| Pcyg1834610002840 | Alkaloid | T3O | medium | pass |
| Pcyg1931770020790 | Alkaloid | T3O | medium | pass |
| Pcyg1943980021870 | Alkaloid | T3O | medium | borderline |
| Pcyg2163360028470 | Alkaloid | T3O | medium | borderline |
| Pcyg2174320031740 | Alkaloid | T3O | medium | pass |
| Pcyg2175670033270 | Alkaloid | T3O | medium | borderline |
| Pcyg2178610035980 | Alkaloid | T3O | medium | borderline |
| Pcyg2192360037660 | Alkaloid | T3O | low | borderline |
| Pcyg2208120041640 | Alkaloid | T3O | medium | borderline |
| Pcyg2391550061860 | Alkaloid | T3O | low | borderline |
| Pcyg2511250073060 | Alkaloid | T3O | low | borderline |
| Pcyg2511720075490 | Alkaloid | T3O | medium | borderline |