PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2548
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANR
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Gene Pathway Family Confidence Status
ROchi01G0002900.1 Flavonoid ANR medium borderline
ROchi01G0002920.1 Flavonoid ANR medium borderline
ROchi01G0002950.1 Flavonoid ANR medium borderline
ROchi01G0002970.1 Flavonoid ANR medium borderline
ROchi01G0002990.1 Flavonoid ANR medium borderline
ROchi01G0003000.1 Flavonoid ANR medium borderline
ROchi01G0003050.1 Flavonoid ANR medium borderline
ROchi01G0003060.1 Flavonoid ANR medium borderline
ROchi01G0003070.1 Flavonoid ANR medium borderline
ROchi01G0003090.1 Flavonoid ANR medium borderline
ROchi01G0003120.1 Flavonoid ANR medium borderline
ROchi01G0003130.1 Flavonoid ANR medium borderline
ROchi01G0003140.1 Flavonoid ANR medium borderline
ROchi01G0003150.1 Flavonoid ANR medium borderline
ROchi01G0017930.1 Flavonoid ANR medium borderline
ROchi01G0026030.1 Flavonoid ANR medium borderline
ROchi01G0026050.1 Flavonoid ANR low borderline
ROchi01G0026070.1 Flavonoid ANR medium borderline
ROchi01G0026100.1 Flavonoid ANR medium borderline
ROchi01G0026120.1 Flavonoid ANR medium borderline
ROchi01G0026140.1 Flavonoid ANR medium borderline
ROchi01G0026170.1 Flavonoid ANR medium borderline
ROchi01G0026200.1 Flavonoid ANR medium borderline
ROchi02G0037430.1 Flavonoid ANR medium borderline
ROchi02G0058660.1 Flavonoid ANR low borderline
ROchi04G0011480.1 Flavonoid ANR low borderline
ROchi04G0035160.1 Flavonoid ANR medium borderline
ROchi05G0003940.1 Flavonoid ANR medium borderline
ROchi05G0029880.1 Flavonoid ANR medium borderline
ROchi05G0041080.1 Flavonoid ANR medium borderline
ROchi05G0055220.1 Flavonoid ANR medium borderline
ROchi06G0028140.1 Flavonoid ANR medium borderline
ROchi06G0041830.1 Flavonoid ANR medium borderline
ROchi06G0047830.1 Flavonoid ANR low borderline
ROchi06G0050230.1 Flavonoid ANR low borderline
ROchi07G0012100.1 Flavonoid ANR medium borderline
ROchi07G0015810.1 Flavonoid ANR medium pass
ROchi07G0015820.1 Flavonoid ANR low borderline
ROchi07G0015830.1 Flavonoid ANR high pass
ROchi07G0032010.1 Flavonoid ANR medium borderline
ROchi07G0032060.1 Flavonoid ANR medium borderline
ROchi07G0033390.1 Flavonoid ANR medium borderline