PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2548
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F5H/CYP84A
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Gene Pathway Family Confidence Status
ROchi00G0023000.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi01G0000940.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi01G0016170.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi01G0022250.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi02G0009140.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi02G0009170.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi02G0009180.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi02G0013950.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi02G0034120.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi02G0039550.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi03G0014040.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi03G0020090.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi03G0020140.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi04G0010710.1 Phenylpropanoid F5H/CYP84A low borderline
ROchi04G0022670.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi04G0022980.1 Phenylpropanoid F5H/CYP84A low borderline
ROchi04G0029610.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi04G0031310.1 Phenylpropanoid F5H/CYP84A low borderline
ROchi04G0032940.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi05G0034520.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi05G0035970.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi05G0043260.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi05G0045880.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi07G0005700.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi07G0007230.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi07G0008780.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi07G0013040.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi07G0017520.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi07G0021270.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi07G0021330.1 Phenylpropanoid F5H/CYP84A medium borderline
ROchi07G0021340.1 Phenylpropanoid F5H/CYP84A medium borderline