PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2548
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
ROchi00G0012870.1 Alkaloid IO medium borderline
ROchi00G0023000.1 Alkaloid IO medium borderline
ROchi01G0000940.1 Alkaloid IO medium borderline
ROchi01G0000980.1 Alkaloid IO medium borderline
ROchi01G0014060.1 Alkaloid IO medium borderline
ROchi01G0026720.1 Alkaloid IO medium borderline
ROchi01G0030140.1 Alkaloid IO low borderline
ROchi02G0018820.1 Alkaloid IO medium borderline
ROchi02G0018970.1 Alkaloid IO medium borderline
ROchi02G0027490.1 Alkaloid IO low borderline
ROchi02G0034740.1 Alkaloid IO low borderline
ROchi02G0061500.1 Alkaloid IO medium borderline
ROchi03G0018880.1 Alkaloid IO medium borderline
ROchi03G0020070.1 Alkaloid IO medium borderline
ROchi03G0020090.1 Alkaloid IO medium borderline
ROchi03G0020120.1 Alkaloid IO medium borderline
ROchi03G0020140.1 Alkaloid IO medium borderline
ROchi03G0020450.1 Alkaloid IO medium borderline
ROchi04G0004730.1 Alkaloid IO low borderline
ROchi04G0029610.1 Alkaloid IO medium borderline
ROchi04G0030950.1 Alkaloid IO medium borderline
ROchi04G0032880.1 Alkaloid IO medium borderline
ROchi05G0029530.1 Alkaloid IO medium borderline
ROchi05G0034520.1 Alkaloid IO medium borderline
ROchi05G0045880.1 Alkaloid IO medium borderline
ROchi05G0048650.1 Alkaloid IO medium borderline
ROchi05G0056640.1 Alkaloid IO medium borderline
ROchi06G0013110.1 Alkaloid IO low borderline
ROchi06G0013150.1 Alkaloid IO low borderline
ROchi06G0043290.1 Alkaloid IO low borderline
ROchi06G0043390.1 Alkaloid IO low borderline
ROchi06G0053170.1 Alkaloid IO medium borderline
ROchi06G0054260.1 Alkaloid IO low borderline
ROchi07G0004950.1 Alkaloid IO low borderline
ROchi07G0007230.1 Alkaloid IO medium pass
ROchi07G0019910.1 Alkaloid IO medium borderline
ROchi07G0021140.1 Alkaloid IO medium borderline
ROchi07G0021250.1 Alkaloid IO medium borderline
ROchi07G0033700.1 Alkaloid IO medium borderline