PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2548
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
ROchi00G0003980.1 Alkaloid T16H medium borderline
ROchi01G0015090.1 Alkaloid T16H medium borderline
ROchi01G0015100.1 Alkaloid T16H medium borderline
ROchi01G0016160.1 Alkaloid T16H medium borderline
ROchi01G0016170.1 Alkaloid T16H medium borderline
ROchi01G0017780.1 Alkaloid T16H medium borderline
ROchi01G0022250.1 Alkaloid T16H medium borderline
ROchi01G0033610.1 Alkaloid T16H low borderline
ROchi01G0033650.1 Alkaloid T16H medium borderline
ROchi01G0046650.1 Alkaloid T16H low borderline
ROchi01G0046900.1 Alkaloid T16H low borderline
ROchi02G0009130.1 Alkaloid T16H low borderline
ROchi02G0009140.1 Alkaloid T16H medium borderline
ROchi02G0009170.1 Alkaloid T16H medium borderline
ROchi02G0014660.1 Alkaloid T16H medium borderline
ROchi02G0059040.1 Alkaloid T16H medium borderline
ROchi03G0009050.1 Alkaloid T16H medium borderline
ROchi03G0010140.1 Alkaloid T16H medium pass
ROchi03G0037130.1 Alkaloid T16H medium borderline
ROchi03G0037140.1 Alkaloid T16H medium borderline
ROchi04G0007880.1 Alkaloid T16H medium borderline
ROchi04G0031330.1 Alkaloid T16H medium borderline
ROchi04G0032940.1 Alkaloid T16H low borderline
ROchi05G0019850.1 Alkaloid T16H medium borderline
ROchi05G0029020.1 Alkaloid T16H medium borderline
ROchi05G0043220.1 Alkaloid T16H medium borderline
ROchi05G0045890.1 Alkaloid T16H low borderline
ROchi05G0048610.1 Alkaloid T16H medium borderline
ROchi05G0056750.1 Alkaloid T16H medium borderline
ROchi06G0026950.1 Alkaloid T16H medium borderline
ROchi06G0029760.1 Alkaloid T16H low borderline
ROchi06G0051370.1 Alkaloid T16H medium pass
ROchi07G0007200.1 Alkaloid T16H medium borderline
ROchi07G0012030.1 Alkaloid T16H medium borderline
ROchi07G0012040.1 Alkaloid T16H medium borderline
ROchi07G0013040.1 Alkaloid T16H low borderline
ROchi07G0013110.1 Alkaloid T16H medium borderline
ROchi07G0013130.1 Alkaloid T16H medium borderline
ROchi07G0021310.1 Alkaloid T16H medium borderline
ROchi07G0033040.1 Alkaloid T16H medium borderline
ROchi07G0045290.1 Alkaloid T16H medium borderline