PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2548
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
ROchi00G0002330.1 Flavonoid F3H medium borderline
ROchi00G0002730.1 Flavonoid F3H medium borderline
ROchi00G0010550.1 Flavonoid F3H low borderline
ROchi00G0015320.1 Flavonoid F3H medium borderline
ROchi01G0010020.1 Flavonoid F3H medium borderline
ROchi01G0016070.1 Flavonoid F3H medium borderline
ROchi01G0017190.1 Flavonoid F3H medium pass
ROchi01G0017210.1 Flavonoid F3H medium borderline
ROchi01G0018540.1 Flavonoid F3H medium borderline
ROchi01G0018840.1 Flavonoid F3H low borderline
ROchi01G0018850.1 Flavonoid F3H medium pass
ROchi01G0027070.1 Flavonoid F3H medium pass
ROchi01G0027090.1 Flavonoid F3H medium pass
ROchi01G0027100.1 Flavonoid F3H medium borderline
ROchi01G0027110.1 Flavonoid F3H medium pass
ROchi01G0028910.1 Flavonoid F3H medium borderline
ROchi01G0028950.1 Flavonoid F3H medium borderline
ROchi01G0030060.1 Flavonoid F3H low borderline
ROchi01G0032580.1 Flavonoid F3H medium borderline
ROchi01G0032590.1 Flavonoid F3H medium borderline
ROchi01G0034730.1 Flavonoid F3H medium borderline
ROchi01G0042380.1 Flavonoid F3H medium borderline
ROchi01G0045060.1 Flavonoid F3H medium borderline
ROchi01G0047260.1 Flavonoid F3H medium borderline
ROchi01G0052390.1 Flavonoid F3H medium borderline
ROchi02G0002550.1 Flavonoid F3H medium borderline
ROchi02G0002560.1 Flavonoid F3H medium borderline
ROchi02G0002570.1 Flavonoid F3H medium borderline
ROchi02G0002580.1 Flavonoid F3H medium borderline
ROchi02G0002590.1 Flavonoid F3H medium borderline
ROchi02G0002600.1 Flavonoid F3H medium borderline
ROchi02G0002610.1 Flavonoid F3H medium borderline
ROchi02G0002620.1 Flavonoid F3H medium borderline
ROchi02G0004560.1 Flavonoid F3H low borderline
ROchi02G0006210.1 Flavonoid F3H low borderline
ROchi02G0007420.1 Flavonoid F3H medium borderline
ROchi02G0010090.1 Flavonoid F3H low borderline
ROchi02G0010430.1 Flavonoid F3H low borderline
ROchi02G0012770.1 Flavonoid F3H medium borderline
ROchi02G0019710.1 Flavonoid F3H low borderline
ROchi02G0036710.1 Flavonoid F3H medium borderline
ROchi02G0036720.1 Flavonoid F3H medium borderline
ROchi02G0036750.1 Flavonoid F3H medium borderline
ROchi02G0040730.1 Flavonoid F3H low borderline
ROchi02G0040740.1 Flavonoid F3H low borderline
ROchi02G0040770.1 Flavonoid F3H low borderline
ROchi02G0040810.1 Flavonoid F3H medium borderline
ROchi02G0046580.1 Flavonoid F3H medium borderline
ROchi03G0006900.1 Flavonoid F3H medium pass
ROchi03G0016270.1 Flavonoid F3H medium borderline