PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2548
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
ROchi03G0016350.1 Flavonoid F3H medium borderline
ROchi03G0019550.1 Flavonoid F3H medium borderline
ROchi03G0022990.1 Flavonoid F3H low borderline
ROchi03G0023000.1 Flavonoid F3H medium borderline
ROchi03G0023030.1 Flavonoid F3H medium borderline
ROchi03G0023040.1 Flavonoid F3H medium borderline
ROchi03G0023060.1 Flavonoid F3H low borderline
ROchi03G0023070.1 Flavonoid F3H medium borderline
ROchi03G0023140.1 Flavonoid F3H medium borderline
ROchi03G0025480.1 Flavonoid F3H medium borderline
ROchi03G0031140.1 Flavonoid F3H medium borderline
ROchi04G0003200.1 Flavonoid F3H medium borderline
ROchi04G0003290.1 Flavonoid F3H medium borderline
ROchi04G0003330.1 Flavonoid F3H medium borderline
ROchi04G0003340.1 Flavonoid F3H medium borderline
ROchi04G0003350.1 Flavonoid F3H medium borderline
ROchi04G0003360.1 Flavonoid F3H medium borderline
ROchi04G0003370.1 Flavonoid F3H medium borderline
ROchi04G0003410.1 Flavonoid F3H medium borderline
ROchi04G0003430.1 Flavonoid F3H medium borderline
ROchi04G0003450.1 Flavonoid F3H medium borderline
ROchi04G0003480.1 Flavonoid F3H medium borderline
ROchi04G0003500.1 Flavonoid F3H low borderline
ROchi04G0003510.1 Flavonoid F3H medium borderline
ROchi04G0003520.1 Flavonoid F3H medium borderline
ROchi04G0003530.1 Flavonoid F3H medium pass
ROchi04G0003560.1 Flavonoid F3H medium borderline
ROchi04G0003570.1 Flavonoid F3H medium borderline
ROchi04G0003580.1 Flavonoid F3H medium borderline
ROchi04G0003590.1 Flavonoid F3H low borderline
ROchi04G0003610.1 Flavonoid F3H medium borderline
ROchi04G0003630.1 Flavonoid F3H medium borderline
ROchi04G0003640.1 Flavonoid F3H medium borderline
ROchi04G0003650.1 Flavonoid F3H medium borderline
ROchi04G0013310.1 Flavonoid F3H medium borderline
ROchi04G0014550.1 Flavonoid F3H low borderline
ROchi04G0014610.1 Flavonoid F3H low borderline
ROchi04G0016050.1 Flavonoid F3H medium borderline
ROchi04G0024240.1 Flavonoid F3H medium borderline
ROchi04G0027510.1 Flavonoid F3H medium borderline
ROchi04G0029930.1 Flavonoid F3H medium borderline
ROchi04G0041500.1 Flavonoid F3H medium borderline
ROchi04G0044140.1 Flavonoid F3H medium borderline
ROchi05G0000780.1 Flavonoid F3H low borderline
ROchi05G0001550.1 Flavonoid F3H medium borderline
ROchi05G0003420.1 Flavonoid F3H medium borderline
ROchi05G0010740.1 Flavonoid F3H medium borderline
ROchi05G0012060.1 Flavonoid F3H medium borderline
ROchi05G0020890.1 Flavonoid F3H medium borderline
ROchi05G0023560.1 Flavonoid F3H medium borderline