PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2548
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
ROchi05G0023570.1 Flavonoid F3H medium borderline
ROchi05G0030390.1 Flavonoid F3H medium borderline
ROchi05G0034980.1 Flavonoid F3H low borderline
ROchi05G0035030.1 Flavonoid F3H low borderline
ROchi05G0037290.1 Flavonoid F3H medium pass
ROchi05G0053300.1 Flavonoid F3H medium borderline
ROchi05G0062650.1 Flavonoid F3H low borderline
ROchi05G0063150.1 Flavonoid F3H low borderline
ROchi05G0063170.1 Flavonoid F3H low borderline
ROchi05G0063190.1 Flavonoid F3H low borderline
ROchi05G0063230.1 Flavonoid F3H low borderline
ROchi05G0063250.1 Flavonoid F3H low borderline
ROchi06G0001970.1 Flavonoid F3H medium borderline
ROchi06G0005350.1 Flavonoid F3H low borderline
ROchi06G0005370.1 Flavonoid F3H low borderline
ROchi06G0005480.1 Flavonoid F3H low borderline
ROchi06G0005510.1 Flavonoid F3H low borderline
ROchi06G0005520.1 Flavonoid F3H low borderline
ROchi06G0006980.1 Flavonoid F3H medium borderline
ROchi06G0011910.1 Flavonoid F3H medium borderline
ROchi06G0011930.1 Flavonoid F3H medium borderline
ROchi06G0011940.1 Flavonoid F3H medium borderline
ROchi06G0011950.1 Flavonoid F3H medium borderline
ROchi06G0016090.1 Flavonoid F3H medium borderline
ROchi06G0020180.1 Flavonoid F3H medium borderline
ROchi06G0025380.1 Flavonoid F3H medium borderline
ROchi06G0033670.1 Flavonoid F3H medium borderline
ROchi06G0033720.1 Flavonoid F3H medium borderline
ROchi06G0033800.1 Flavonoid F3H low borderline
ROchi06G0033810.1 Flavonoid F3H medium borderline
ROchi06G0033820.1 Flavonoid F3H medium pass
ROchi06G0033850.1 Flavonoid F3H medium borderline
ROchi06G0033870.1 Flavonoid F3H medium borderline
ROchi06G0033930.1 Flavonoid F3H medium borderline
ROchi06G0033950.1 Flavonoid F3H medium borderline
ROchi06G0033970.1 Flavonoid F3H medium borderline
ROchi06G0033990.1 Flavonoid F3H medium pass
ROchi06G0034000.1 Flavonoid F3H medium borderline
ROchi06G0034010.1 Flavonoid F3H medium borderline
ROchi06G0043650.1 Flavonoid F3H medium borderline
ROchi06G0044630.1 Flavonoid F3H medium borderline
ROchi06G0044830.1 Flavonoid F3H medium borderline
ROchi06G0044840.1 Flavonoid F3H medium borderline
ROchi06G0044930.1 Flavonoid F3H medium borderline
ROchi06G0049820.1 Flavonoid F3H medium borderline
ROchi06G0052830.1 Flavonoid F3H medium borderline
ROchi06G0052940.1 Flavonoid F3H low borderline
ROchi06G0054080.1 Flavonoid F3H low borderline
ROchi06G0054720.1 Flavonoid F3H low borderline
ROchi07G0009350.1 Flavonoid F3H medium borderline