PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2548
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
ROchi05G0030280.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi05G0030590.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi05G0030650.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi05G0034270.1 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
ROchi05G0046390.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi05G0046400.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi05G0046410.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi05G0046450.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi05G0046960.1 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
ROchi05G0046970.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi05G0050470.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi06G0003640.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi06G0003650.1 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
ROchi06G0003710.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi06G0003930.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi06G0006880.1 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO
ROchi06G0016130.1 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
ROchi06G0019760.1 Terpenoid TPS medium pass TPS__00045__sp_A0A4Y5L9K3_T16CC_CANSA
ROchi06G0022720.1 Terpenoid TPS medium pass TPS__00054__sp_A0A7J6HK32_TS9FN_CANSA
ROchi06G0022730.1 Terpenoid TPS medium pass TPS__00025__sp_A0A1V0QSG6_TS4FN_CANSA
ROchi06G0035670.1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
ROchi06G0035700.1 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
ROchi06G0048350.1 Terpenoid TPS medium pass TPS__00020__sp_A0A1V0QSF6_TS7FN_CANSA
ROchi07G0027470.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi07G0028960.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO
ROchi07G0040560.1 Terpenoid TPS medium pass TPS__00076__sp_D0UZK2_TPS1_CITSI
ROchi07G0041220.1 Terpenoid TPS medium pass TPS__00060__sp_B9S9Z3_TPS1_RICCO