PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2770
Candidate Protein Records
2548
Pathway-Level Records
6049
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ROchi05G0048650.1 Alkaloid IO medium borderline
ROchi05G0056640.1 Alkaloid IO medium borderline
ROchi06G0013110.1 Alkaloid IO low borderline
ROchi06G0013150.1 Alkaloid IO low borderline
ROchi06G0043290.1 Alkaloid IO low borderline
ROchi06G0043390.1 Alkaloid IO low borderline
ROchi06G0053170.1 Alkaloid IO medium borderline
ROchi06G0054260.1 Alkaloid IO low borderline
ROchi07G0004950.1 Alkaloid IO low borderline
ROchi07G0007230.1 Alkaloid IO medium pass
ROchi07G0019910.1 Alkaloid IO medium borderline
ROchi07G0021140.1 Alkaloid IO medium borderline
ROchi07G0021250.1 Alkaloid IO medium borderline
ROchi07G0033700.1 Alkaloid IO medium borderline
ROchi03G0001010.1 Alkaloid ISY low borderline
ROchi05G0053890.1 Alkaloid ISY medium pass
ROchi06G0007650.1 Alkaloid ISY high pass
ROchi06G0007670.1 Alkaloid ISY high pass
ROchi06G0051490.1 Alkaloid ISY high pass
ROchi06G0051500.1 Alkaloid ISY medium pass
ROchi06G0051510.1 Alkaloid ISY high pass
ROchi06G0051520.1 Alkaloid ISY medium pass
ROchi00G0013480.1 Alkaloid LAMT medium borderline
ROchi00G0013520.1 Alkaloid LAMT medium borderline
ROchi01G0008160.1 Alkaloid LAMT medium borderline
ROchi01G0008220.1 Alkaloid LAMT medium borderline
ROchi01G0009540.1 Alkaloid LAMT medium borderline
ROchi01G0009550.1 Alkaloid LAMT medium borderline
ROchi02G0034140.1 Alkaloid LAMT medium borderline
ROchi02G0040550.1 Alkaloid LAMT medium borderline
ROchi03G0006280.1 Alkaloid LAMT medium borderline
ROchi03G0006290.1 Alkaloid LAMT medium borderline
ROchi03G0006300.1 Alkaloid LAMT medium borderline
ROchi03G0006310.1 Alkaloid LAMT medium borderline
ROchi04G0010450.1 Alkaloid LAMT medium borderline
ROchi04G0010460.1 Alkaloid LAMT medium borderline
ROchi04G0041030.1 Alkaloid LAMT medium borderline
ROchi04G0041040.1 Alkaloid LAMT medium borderline
ROchi04G0044350.1 Alkaloid LAMT medium borderline
ROchi05G0033440.1 Alkaloid LAMT medium borderline
ROchi05G0055710.1 Alkaloid LAMT low borderline
ROchi06G0015900.1 Alkaloid LAMT medium borderline
ROchi06G0015920.1 Alkaloid LAMT medium borderline
ROchi07G0001930.1 Alkaloid LAMT medium borderline
ROchi07G0001940.1 Alkaloid LAMT medium pass
ROchi07G0001970.1 Alkaloid LAMT medium borderline
ROchi07G0001980.1 Alkaloid LAMT medium borderline
ROchi07G0002000.1 Alkaloid LAMT medium borderline
ROchi07G0002010.1 Alkaloid LAMT medium pass
ROchi07G0002020.1 Alkaloid LAMT medium borderline