PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2770
Candidate Protein Records
2548
Pathway-Level Records
6049
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ROchi02G0004720.1 Alkaloid PMT low borderline
ROchi02G0008600.1 Alkaloid PMT low borderline
ROchi02G0037070.1 Alkaloid PMT medium pass
ROchi02G0037100.1 Alkaloid PMT low borderline
ROchi02G0061850.1 Alkaloid PMT medium pass
ROchi03G0006250.1 Alkaloid PMT medium pass
ROchi03G0007710.1 Alkaloid PMT low borderline
ROchi03G0007730.1 Alkaloid PMT low borderline
ROchi04G0020210.1 Alkaloid PMT medium pass
ROchi04G0042220.1 Alkaloid PMT medium borderline
ROchi05G0051630.1 Alkaloid PMT low borderline
ROchi05G0051640.1 Alkaloid PMT low borderline
ROchi05G0051690.1 Alkaloid PMT low borderline
ROchi05G0051700.1 Alkaloid PMT low borderline
ROchi05G0051750.1 Alkaloid PMT low borderline
ROchi05G0051790.1 Alkaloid PMT low borderline
ROchi05G0051800.1 Alkaloid PMT medium pass
ROchi05G0051830.1 Alkaloid PMT low borderline
ROchi05G0064310.1 Alkaloid PMT low borderline
ROchi06G0021290.1 Alkaloid PMT medium pass
ROchi06G0047370.1 Alkaloid PMT low borderline
ROchi06G0047380.1 Alkaloid PMT low borderline
ROchi06G0053590.1 Alkaloid PMT medium pass
ROchi07G0010880.1 Alkaloid PMT low borderline
ROchi07G0014760.1 Alkaloid PMT medium borderline
ROchi07G0027250.1 Alkaloid PMT low borderline
ROchi07G0030130.1 Alkaloid PMT medium pass
ROchi07G0030230.1 Alkaloid PMT medium pass
ROchi07G0030270.1 Alkaloid PMT low borderline
ROchi07G0036610.1 Alkaloid PMT medium pass
ROchi00G0011090.1 Alkaloid PYKS low borderline
ROchi01G0002210.1 Alkaloid PYKS high pass
ROchi01G0002220.1 Alkaloid PYKS high pass
ROchi01G0002230.1 Alkaloid PYKS high pass
ROchi01G0022830.1 Alkaloid PYKS high pass
ROchi01G0034410.1 Alkaloid PYKS low borderline
ROchi01G0037950.1 Alkaloid PYKS low borderline
ROchi01G0038220.1 Alkaloid PYKS low borderline
ROchi02G0053240.1 Alkaloid PYKS low borderline
ROchi04G0009720.1 Alkaloid PYKS high pass
ROchi05G0048550.1 Alkaloid PYKS low borderline
ROchi06G0003600.1 Alkaloid PYKS high pass
ROchi06G0015640.1 Alkaloid PYKS low borderline
ROchi06G0016680.1 Alkaloid PYKS low borderline
ROchi06G0016730.1 Alkaloid PYKS low borderline
ROchi06G0016750.1 Alkaloid PYKS low borderline
ROchi06G0022090.1 Alkaloid PYKS low borderline
ROchi06G0039520.1 Alkaloid PYKS low borderline
ROchi06G0040400.1 Alkaloid PYKS high pass
ROchi06G0040420.1 Alkaloid PYKS high pass