PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2770
Candidate Protein Records
2548
Pathway-Level Records
6049
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ROchi01G0030160.1 Alkaloid T3O medium pass
ROchi01G0030170.1 Alkaloid T3O low borderline
ROchi01G0033490.1 Alkaloid T3O medium borderline
ROchi01G0033500.1 Alkaloid T3O medium borderline
ROchi01G0033520.1 Alkaloid T3O medium borderline
ROchi01G0042110.1 Alkaloid T3O medium pass
ROchi01G0043970.1 Alkaloid T3O medium pass
ROchi02G0009120.1 Alkaloid T3O medium borderline
ROchi02G0009290.1 Alkaloid T3O medium borderline
ROchi02G0009300.1 Alkaloid T3O medium borderline
ROchi02G0009310.1 Alkaloid T3O medium borderline
ROchi02G0013030.1 Alkaloid T3O medium borderline
ROchi02G0013220.1 Alkaloid T3O medium borderline
ROchi02G0013350.1 Alkaloid T3O medium pass
ROchi02G0013950.1 Alkaloid T3O medium pass
ROchi02G0015980.1 Alkaloid T3O medium borderline
ROchi02G0017730.1 Alkaloid T3O medium pass
ROchi02G0018840.1 Alkaloid T3O medium borderline
ROchi02G0018910.1 Alkaloid T3O medium borderline
ROchi02G0019560.1 Alkaloid T3O medium borderline
ROchi02G0025950.1 Alkaloid T3O medium borderline
ROchi02G0026420.1 Alkaloid T3O medium borderline
ROchi02G0026440.1 Alkaloid T3O medium borderline
ROchi02G0034120.1 Alkaloid T3O medium pass
ROchi02G0034790.1 Alkaloid T3O medium borderline
ROchi02G0053570.1 Alkaloid T3O medium pass
ROchi02G0059800.1 Alkaloid T3O low borderline
ROchi02G0061370.1 Alkaloid T3O low borderline
ROchi02G0061510.1 Alkaloid T3O medium borderline
ROchi02G0061550.1 Alkaloid T3O medium borderline
ROchi02G0061560.1 Alkaloid T3O medium borderline
ROchi03G0001090.1 Alkaloid T3O medium borderline
ROchi03G0002790.1 Alkaloid T3O low borderline
ROchi03G0011700.1 Alkaloid T3O medium borderline
ROchi03G0011720.1 Alkaloid T3O medium borderline
ROchi03G0014040.1 Alkaloid T3O medium borderline
ROchi03G0020870.1 Alkaloid T3O low borderline
ROchi03G0037120.1 Alkaloid T3O medium borderline
ROchi03G0037150.1 Alkaloid T3O medium borderline
ROchi04G0004660.1 Alkaloid T3O medium pass
ROchi04G0004690.1 Alkaloid T3O medium pass
ROchi04G0004740.1 Alkaloid T3O low borderline
ROchi04G0004770.1 Alkaloid T3O medium pass
ROchi04G0016480.1 Alkaloid T3O medium borderline
ROchi04G0020740.1 Alkaloid T3O medium borderline
ROchi04G0021550.1 Alkaloid T3O medium borderline
ROchi04G0022580.1 Alkaloid T3O medium borderline
ROchi04G0022650.1 Alkaloid T3O medium borderline
ROchi04G0022670.1 Alkaloid T3O medium borderline
ROchi04G0022690.1 Alkaloid T3O medium borderline