PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2548
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
ROchi07G0015810.1 Flavonoid ANR medium pass
ROchi07G0015820.1 Flavonoid ANR low borderline
ROchi07G0015830.1 Flavonoid ANR high pass
ROchi07G0032010.1 Flavonoid ANR medium borderline
ROchi07G0032060.1 Flavonoid ANR medium borderline
ROchi07G0033390.1 Flavonoid ANR medium borderline
ROchi03G0016360.1 Flavonoid ANS/LDOX medium borderline
ROchi03G0023080.1 Flavonoid ANS/LDOX medium borderline
ROchi03G0023110.1 Flavonoid ANS/LDOX medium borderline
ROchi03G0023120.1 Flavonoid ANS/LDOX medium borderline
ROchi04G0003490.1 Flavonoid ANS/LDOX medium borderline
ROchi04G0003600.1 Flavonoid ANS/LDOX low borderline
ROchi04G0033270.1 Flavonoid ANS/LDOX medium pass
ROchi04G0036510.1 Flavonoid ANS/LDOX medium borderline
ROchi04G0041480.1 Flavonoid ANS/LDOX medium borderline
ROchi05G0010750.1 Flavonoid ANS/LDOX medium borderline
ROchi05G0021030.1 Flavonoid ANS/LDOX medium borderline
ROchi05G0022660.1 Flavonoid ANS/LDOX medium borderline
ROchi06G0007000.1 Flavonoid ANS/LDOX low borderline
ROchi06G0033920.1 Flavonoid ANS/LDOX medium borderline
ROchi00G0005980.1 Flavonoid C4H medium borderline
ROchi00G0005990.1 Flavonoid C4H medium borderline
ROchi01G0014060.1 Flavonoid C4H medium borderline
ROchi01G0017780.1 Flavonoid C4H low borderline
ROchi01G0017810.1 Flavonoid C4H medium borderline
ROchi01G0017830.1 Flavonoid C4H medium borderline
ROchi03G0020460.1 Flavonoid C4H low borderline
ROchi03G0037130.1 Flavonoid C4H medium borderline
ROchi04G0023470.1 Flavonoid C4H medium borderline
ROchi04G0023480.1 Flavonoid C4H medium borderline
ROchi04G0031290.1 Flavonoid C4H low borderline
ROchi04G0031990.1 Flavonoid C4H low borderline
ROchi04G0036850.1 Flavonoid C4H medium borderline
ROchi04G0036950.1 Flavonoid C4H medium borderline
ROchi04G0037000.1 Flavonoid C4H medium borderline
ROchi05G0046680.1 Flavonoid C4H medium borderline
ROchi05G0056750.1 Flavonoid C4H medium borderline
ROchi06G0051360.1 Flavonoid C4H low borderline
ROchi01G0038130.1 Flavonoid CHI medium pass
ROchi01G0043940.1 Flavonoid CHI medium pass
ROchi07G0035720.1 Flavonoid CHI medium pass
ROchi01G0002210.1 Flavonoid CHS medium pass
ROchi01G0002220.1 Flavonoid CHS medium pass
ROchi01G0002230.1 Flavonoid CHS medium pass
ROchi01G0022830.1 Flavonoid CHS medium pass
ROchi04G0002080.1 Flavonoid CHS low borderline
ROchi04G0009720.1 Flavonoid CHS medium pass
ROchi06G0003600.1 Flavonoid CHS medium pass
ROchi06G0040400.1 Flavonoid CHS medium pass
ROchi06G0040420.1 Flavonoid CHS medium pass