PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2770
Candidate Protein Records
2548
Pathway-Level Records
6049
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ROchi04G0022700.1 Alkaloid T3O medium borderline
ROchi04G0022720.1 Alkaloid T3O medium borderline
ROchi04G0022990.1 Alkaloid T3O medium borderline
ROchi04G0023320.1 Alkaloid T3O medium borderline
ROchi04G0023830.1 Alkaloid T3O medium borderline
ROchi04G0024560.1 Alkaloid T3O medium borderline
ROchi04G0030710.1 Alkaloid T3O medium borderline
ROchi04G0031270.1 Alkaloid T3O medium borderline
ROchi04G0031320.1 Alkaloid T3O medium borderline
ROchi04G0031340.1 Alkaloid T3O medium borderline
ROchi04G0031480.1 Alkaloid T3O medium borderline
ROchi04G0031970.1 Alkaloid T3O medium borderline
ROchi04G0032020.1 Alkaloid T3O medium borderline
ROchi04G0032930.1 Alkaloid T3O medium borderline
ROchi04G0033570.1 Alkaloid T3O medium pass
ROchi04G0033960.1 Alkaloid T3O medium pass
ROchi04G0033970.1 Alkaloid T3O low borderline
ROchi04G0034000.1 Alkaloid T3O medium pass
ROchi04G0034010.1 Alkaloid T3O medium pass
ROchi04G0036990.1 Alkaloid T3O medium borderline
ROchi04G0038460.1 Alkaloid T3O low borderline
ROchi04G0044600.1 Alkaloid T3O low borderline
ROchi05G0011700.1 Alkaloid T3O low borderline
ROchi05G0012480.1 Alkaloid T3O low borderline
ROchi05G0015640.1 Alkaloid T3O medium pass
ROchi05G0015680.1 Alkaloid T3O medium pass
ROchi05G0015690.1 Alkaloid T3O medium pass
ROchi05G0019760.1 Alkaloid T3O low borderline
ROchi05G0019790.1 Alkaloid T3O low borderline
ROchi05G0021480.1 Alkaloid T3O medium pass
ROchi05G0023550.1 Alkaloid T3O medium borderline
ROchi05G0029550.1 Alkaloid T3O medium borderline
ROchi05G0029590.1 Alkaloid T3O medium borderline
ROchi05G0031370.1 Alkaloid T3O medium pass
ROchi05G0031390.1 Alkaloid T3O medium pass
ROchi05G0031400.1 Alkaloid T3O medium pass
ROchi05G0034530.1 Alkaloid T3O medium borderline
ROchi05G0035970.1 Alkaloid T3O medium borderline
ROchi05G0035980.1 Alkaloid T3O medium borderline
ROchi05G0036060.1 Alkaloid T3O medium borderline
ROchi05G0036070.1 Alkaloid T3O medium borderline
ROchi05G0043170.1 Alkaloid T3O medium borderline
ROchi05G0043180.1 Alkaloid T3O medium borderline
ROchi05G0043190.1 Alkaloid T3O medium borderline
ROchi05G0043240.1 Alkaloid T3O medium borderline
ROchi05G0043250.1 Alkaloid T3O medium borderline
ROchi05G0045900.1 Alkaloid T3O medium borderline
ROchi05G0045930.1 Alkaloid T3O medium borderline
ROchi05G0045950.1 Alkaloid T3O medium borderline
ROchi05G0045960.1 Alkaloid T3O medium borderline