PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2548
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
ROchi06G0009190.1 Alkaloid 7DLGT high pass
ROchi06G0009220.1 Alkaloid 7DLGT medium pass
ROchi06G0009250.1 Alkaloid 7DLGT low borderline
ROchi06G0009280.1 Alkaloid 7DLGT low borderline
ROchi06G0009300.1 Alkaloid 7DLGT low borderline
ROchi06G0009680.1 Alkaloid 7DLGT medium pass
ROchi06G0009690.1 Alkaloid 7DLGT medium pass
ROchi06G0009720.1 Alkaloid 7DLGT high pass
ROchi06G0009730.1 Alkaloid 7DLGT low borderline
ROchi06G0009740.1 Alkaloid 7DLGT medium pass
ROchi06G0009750.1 Alkaloid 7DLGT low borderline
ROchi06G0009770.1 Alkaloid 7DLGT low borderline
ROchi06G0009780.1 Alkaloid 7DLGT low borderline
ROchi06G0009800.1 Alkaloid 7DLGT medium pass
ROchi06G0009810.1 Alkaloid 7DLGT low borderline
ROchi06G0009830.1 Alkaloid 7DLGT medium pass
ROchi06G0010070.1 Alkaloid 7DLGT medium pass
ROchi06G0010080.1 Alkaloid 7DLGT low borderline
ROchi06G0010090.1 Alkaloid 7DLGT low borderline
ROchi06G0017320.1 Alkaloid 7DLGT high pass
ROchi06G0024490.1 Alkaloid 7DLGT low borderline
ROchi06G0024500.1 Alkaloid 7DLGT medium pass
ROchi06G0028470.1 Alkaloid 7DLGT low borderline
ROchi06G0028480.1 Alkaloid 7DLGT low borderline
ROchi06G0042930.1 Alkaloid 7DLGT low borderline
ROchi06G0042970.1 Alkaloid 7DLGT high pass
ROchi06G0045990.1 Alkaloid 7DLGT low borderline
ROchi06G0048150.1 Alkaloid 7DLGT low borderline
ROchi06G0048160.1 Alkaloid 7DLGT high pass
ROchi07G0002620.1 Alkaloid 7DLGT high pass
ROchi07G0005240.1 Alkaloid 7DLGT medium pass
ROchi07G0006130.1 Alkaloid 7DLGT low borderline
ROchi07G0015850.1 Alkaloid 7DLGT low borderline
ROchi07G0015860.1 Alkaloid 7DLGT low borderline
ROchi07G0015870.1 Alkaloid 7DLGT low borderline
ROchi07G0015880.1 Alkaloid 7DLGT low borderline
ROchi07G0028000.1 Alkaloid 7DLGT medium pass
ROchi07G0028340.1 Alkaloid 7DLGT low borderline
ROchi07G0029090.1 Alkaloid 7DLGT high pass
ROchi07G0029510.1 Alkaloid 7DLGT low borderline
ROchi07G0029530.1 Alkaloid 7DLGT low borderline
ROchi07G0029540.1 Alkaloid 7DLGT low borderline
ROchi07G0029550.1 Alkaloid 7DLGT low borderline
ROchi07G0029570.1 Alkaloid 7DLGT low borderline
ROchi07G0040620.1 Alkaloid 7DLGT low borderline
ROchi07G0040630.1 Alkaloid 7DLGT low borderline
ROchi07G0043300.1 Alkaloid 7DLGT medium pass
ROchi07G0043310.1 Alkaloid 7DLGT medium pass
ROchi07G0046320.1 Alkaloid 7DLGT low borderline
ROchi07G0049470.1 Alkaloid 7DLGT high pass