PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2548
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
ROchi06G0045110.1 Terpenoid BAHD medium pass
ROchi06G0045560.1 Terpenoid BAHD medium pass
ROchi06G0047370.1 Terpenoid BAHD medium pass
ROchi06G0047380.1 Terpenoid BAHD medium pass
ROchi06G0047410.1 Terpenoid BAHD low borderline
ROchi06G0049930.1 Terpenoid BAHD low borderline
ROchi06G0049950.1 Terpenoid BAHD medium pass
ROchi06G0049960.1 Terpenoid BAHD low borderline
ROchi06G0050700.1 Terpenoid BAHD low borderline
ROchi06G0050710.1 Terpenoid BAHD medium pass
ROchi06G0050820.1 Terpenoid BAHD medium pass
ROchi07G0010400.1 Terpenoid BAHD medium pass
ROchi07G0010670.1 Terpenoid BAHD medium pass
ROchi07G0010880.1 Terpenoid BAHD medium pass
ROchi07G0013550.1 Terpenoid BAHD medium pass
ROchi07G0019030.1 Terpenoid BAHD medium pass
ROchi07G0020910.1 Terpenoid BAHD medium pass
ROchi07G0027250.1 Terpenoid BAHD medium pass
ROchi07G0027280.1 Terpenoid BAHD medium pass
ROchi07G0027310.1 Terpenoid BAHD medium pass
ROchi07G0028420.1 Terpenoid BAHD medium pass
ROchi07G0030130.1 Terpenoid BAHD medium pass
ROchi07G0030230.1 Terpenoid BAHD medium pass
ROchi07G0030270.1 Terpenoid BAHD medium pass
ROchi07G0030570.1 Terpenoid BAHD medium pass
ROchi07G0031620.1 Terpenoid BAHD medium pass
ROchi07G0031720.1 Terpenoid BAHD low borderline
ROchi07G0031730.1 Terpenoid BAHD medium pass
ROchi07G0034110.1 Terpenoid BAHD medium pass
ROchi07G0036610.1 Terpenoid BAHD medium pass
ROchi07G0042860.1 Terpenoid BAHD low borderline
ROchi07G0043050.1 Terpenoid BAHD low borderline
ROchi07G0046650.1 Terpenoid BAHD low borderline
ROchi07G0046680.1 Terpenoid BAHD low borderline
ROchi07G0046800.1 Terpenoid BAHD low borderline
ROchi04G0005130.1 Terpenoid CMK/IspE low borderline
ROchi05G0041410.1 Terpenoid CMK/IspE high pass
ROchi00G0004020.1 Terpenoid CYP71 medium borderline
ROchi01G0011430.1 Terpenoid CYP71 medium borderline
ROchi01G0015090.1 Terpenoid CYP71 medium borderline
ROchi01G0016160.1 Terpenoid CYP71 medium borderline
ROchi01G0016170.1 Terpenoid CYP71 medium pass
ROchi01G0016180.1 Terpenoid CYP71 medium borderline
ROchi01G0022250.1 Terpenoid CYP71 medium borderline
ROchi01G0026550.1 Terpenoid CYP71 medium pass
ROchi01G0042220.1 Terpenoid CYP71 medium pass
ROchi02G0017120.1 Terpenoid CYP71 low borderline
ROchi02G0019820.1 Terpenoid CYP71 low borderline
ROchi02G0025980.1 Terpenoid CYP71 medium pass
ROchi02G0034790.1 Terpenoid CYP71 medium borderline