PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2770
Candidate Protein Records
2548
Pathway-Level Records
6049
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ROchi05G0013760.1 Rosmarinic Acid 4CL low borderline
ROchi05G0037660.1 Rosmarinic Acid 4CL medium pass
ROchi05G0044780.1 Rosmarinic Acid 4CL medium pass
ROchi05G0044790.1 Rosmarinic Acid 4CL medium pass
ROchi05G0044800.1 Rosmarinic Acid 4CL medium pass
ROchi05G0044840.1 Rosmarinic Acid 4CL medium pass
ROchi05G0044950.1 Rosmarinic Acid 4CL medium pass
ROchi05G0044960.1 Rosmarinic Acid 4CL medium pass
ROchi05G0045130.1 Rosmarinic Acid 4CL medium pass
ROchi05G0054800.1 Rosmarinic Acid 4CL medium pass
ROchi06G0013560.1 Rosmarinic Acid 4CL low borderline
ROchi06G0013590.1 Rosmarinic Acid 4CL low borderline
ROchi06G0013630.1 Rosmarinic Acid 4CL low borderline
ROchi06G0013680.1 Rosmarinic Acid 4CL low borderline
ROchi06G0013830.1 Rosmarinic Acid 4CL low borderline
ROchi06G0014310.1 Rosmarinic Acid 4CL low borderline
ROchi06G0014370.1 Rosmarinic Acid 4CL low borderline
ROchi06G0017870.1 Rosmarinic Acid 4CL medium pass
ROchi06G0023020.1 Rosmarinic Acid 4CL medium pass
ROchi06G0042050.1 Rosmarinic Acid 4CL low borderline
ROchi06G0044440.1 Rosmarinic Acid 4CL low borderline
ROchi06G0047230.1 Rosmarinic Acid 4CL medium pass
ROchi07G0002910.1 Rosmarinic Acid 4CL low borderline
ROchi07G0011840.1 Rosmarinic Acid 4CL medium pass
ROchi07G0015580.1 Rosmarinic Acid 4CL low borderline
ROchi07G0018230.1 Rosmarinic Acid 4CL medium pass
ROchi07G0029300.1 Rosmarinic Acid 4CL medium pass
ROchi07G0033710.1 Rosmarinic Acid 4CL medium pass
ROchi00G0000270.1 Rosmarinic Acid C4H low borderline
ROchi00G0003980.1 Rosmarinic Acid C4H low borderline
ROchi00G0003990.1 Rosmarinic Acid C4H medium pass
ROchi00G0004020.1 Rosmarinic Acid C4H medium pass
ROchi00G0005980.1 Rosmarinic Acid C4H low borderline
ROchi00G0005990.1 Rosmarinic Acid C4H low borderline
ROchi00G0007320.1 Rosmarinic Acid C4H low borderline
ROchi00G0010860.1 Rosmarinic Acid C4H low borderline
ROchi00G0011860.1 Rosmarinic Acid C4H medium pass
ROchi00G0011900.1 Rosmarinic Acid C4H low borderline
ROchi00G0012870.1 Rosmarinic Acid C4H low borderline
ROchi00G0012880.1 Rosmarinic Acid C4H low borderline
ROchi00G0013650.1 Rosmarinic Acid C4H low borderline
ROchi00G0013910.1 Rosmarinic Acid C4H low borderline
ROchi00G0014300.1 Rosmarinic Acid C4H medium pass
ROchi00G0014320.1 Rosmarinic Acid C4H medium pass
ROchi00G0014380.1 Rosmarinic Acid C4H medium pass
ROchi00G0020680.1 Rosmarinic Acid C4H medium pass
ROchi00G0021460.1 Rosmarinic Acid C4H low borderline
ROchi00G0021480.1 Rosmarinic Acid C4H low borderline
ROchi00G0023000.1 Rosmarinic Acid C4H low borderline
ROchi01G0000720.1 Rosmarinic Acid C4H medium pass