PlantSME Plant secondary metabolism enzyme database

Rosa chinensis (rosa_chinensis)

Imported from atlas release summary for Rosa chinensis.

2770
Candidate Protein Records
2548
Pathway-Level Records
6049
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 763 20 UGT (301) View species results
Alkaloid pathway 553 25 7DLGT (133) View species results
Phenylpropanoid pathway 497 12 POD (154) View species results
Flavonoid pathway 331 12 UFGT (247) View species results
Rosmarinic acid pathway 221 7 C4H (98) View species results
Steroid pathway 183 14 CAS (86) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2411 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 369 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ROchi05G0023250.1 Alkaloid 7DLH medium borderline
ROchi05G0023310.1 Alkaloid 7DLH medium borderline
ROchi05G0023340.1 Alkaloid 7DLH medium borderline
ROchi05G0023370.1 Alkaloid 7DLH medium borderline
ROchi05G0046680.1 Alkaloid 7DLH medium borderline
ROchi05G0053360.1 Alkaloid 7DLH medium borderline
ROchi05G0057240.1 Alkaloid 7DLH medium borderline
ROchi05G0057250.1 Alkaloid 7DLH medium borderline
ROchi06G0017960.1 Alkaloid 7DLH low borderline
ROchi06G0021070.1 Alkaloid 7DLH medium borderline
ROchi06G0034240.1 Alkaloid 7DLH low borderline
ROchi06G0042870.1 Alkaloid 7DLH low borderline
ROchi06G0053730.1 Alkaloid 7DLH medium borderline
ROchi07G0023310.1 Alkaloid 7DLH medium borderline
ROchi01G0000350.1 Alkaloid 8HGO low borderline
ROchi01G0001610.1 Alkaloid 8HGO medium borderline
ROchi01G0012990.1 Alkaloid 8HGO medium borderline
ROchi01G0053570.1 Alkaloid 8HGO medium borderline
ROchi02G0013630.1 Alkaloid 8HGO low borderline
ROchi02G0042190.1 Alkaloid 8HGO low borderline
ROchi03G0025860.1 Alkaloid 8HGO low borderline
ROchi05G0048190.1 Alkaloid 8HGO low borderline
ROchi06G0024670.1 Alkaloid 8HGO medium borderline
ROchi06G0024720.1 Alkaloid 8HGO medium pass
ROchi06G0024730.1 Alkaloid 8HGO medium borderline
ROchi06G0024740.1 Alkaloid 8HGO medium borderline
ROchi06G0024750.1 Alkaloid 8HGO medium borderline
ROchi06G0024760.1 Alkaloid 8HGO medium borderline
ROchi06G0031540.1 Alkaloid 8HGO medium borderline
ROchi06G0047140.1 Alkaloid 8HGO medium borderline
ROchi06G0047150.1 Alkaloid 8HGO medium borderline
ROchi06G0047160.1 Alkaloid 8HGO medium borderline
ROchi07G0000120.1 Alkaloid 8HGO medium borderline
ROchi07G0009130.1 Alkaloid 8HGO medium borderline
ROchi07G0009140.1 Alkaloid 8HGO medium borderline
ROchi02G0034520.1 Alkaloid ADC low borderline
ROchi03G0013040.1 Alkaloid BBE low borderline
ROchi04G0031540.1 Alkaloid BBE medium borderline
ROchi04G0031550.1 Alkaloid BBE medium borderline
ROchi04G0031560.1 Alkaloid BBE low borderline
ROchi04G0031580.1 Alkaloid BBE medium borderline
ROchi05G0014870.1 Alkaloid BBE medium borderline
ROchi05G0014880.1 Alkaloid BBE medium borderline
ROchi05G0014900.1 Alkaloid BBE medium borderline
ROchi05G0014910.1 Alkaloid BBE medium borderline
ROchi05G0014920.1 Alkaloid BBE medium borderline
ROchi05G0014940.1 Alkaloid BBE medium borderline
ROchi05G0014950.1 Alkaloid BBE medium borderline
ROchi05G0014960.1 Alkaloid BBE medium borderline
ROchi05G0014970.1 Alkaloid BBE medium borderline