PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_7480367090 Alkaloid NMT medium pass
Srurcontig_7480367110 Alkaloid NMT medium pass
Srurcontig_7540369610 Alkaloid NMT low borderline
Srurcontig_7560377540 Alkaloid NMT medium borderline
Srurcontig_7560377550 Alkaloid NMT medium borderline
Srurcontig_7560377630 Alkaloid NMT medium borderline
Srurcontig_7570379250 Alkaloid NMT medium pass
Srurcontig_7570379800 Alkaloid NMT low borderline
Srurcontig_7570380350 Alkaloid NMT medium pass
Srurcontig_7590385600 Alkaloid NMT medium pass
Srurcontig_7590387010 Alkaloid NMT low borderline
Srurcontig_7590388010 Alkaloid NMT low borderline
Srurcontig_7590388250 Alkaloid NMT medium borderline
Srurcontig_770392690 Alkaloid NMT low borderline
Srurcontig_770393100 Alkaloid NMT medium pass
Srurcontig_8060412590 Alkaloid NMT low borderline
Srurcontig_8110416440 Alkaloid NMT medium pass
Srurcontig_8110417280 Alkaloid NMT low borderline
Srurcontig_8290424420 Alkaloid NMT medium pass
Srurcontig_8430428990 Alkaloid NMT medium borderline
Srurcontig_8500436760 Alkaloid NMT medium pass
Srurcontig_8530438690 Alkaloid NMT low borderline
Srurcontig_8560440600 Alkaloid NMT low borderline
Srurcontig_8560440890 Alkaloid NMT low borderline
Srurcontig_8620445280 Alkaloid NMT low borderline
Srurcontig_8640445500 Alkaloid NMT low borderline
Srurcontig_8640445510 Alkaloid NMT medium borderline
Srurcontig_8640445540 Alkaloid NMT medium borderline
Srurcontig_8650445860 Alkaloid NMT medium pass
Srurcontig_8880453590 Alkaloid NMT medium pass
Srurcontig_8880454320 Alkaloid NMT medium pass
Srurcontig_8990458820 Alkaloid NMT medium borderline
Srurcontig_8990458850 Alkaloid NMT medium borderline
Srurcontig_9130468870 Alkaloid NMT medium pass
Srurcontig_9140469310 Alkaloid NMT low borderline
Srurcontig_9160473880 Alkaloid NMT low borderline
Srurcontig_930477200 Alkaloid NMT low borderline
Srurcontig_9360479810 Alkaloid NMT medium pass
Srurcontig_9410481840 Alkaloid NMT low borderline
Srurcontig_9760492820 Alkaloid NMT medium borderline
Srurcontig_990500460 Alkaloid NMT medium pass
Srurcontig_9980504350 Alkaloid NMT low borderline
Srurcontig_10470021090 Alkaloid PMT medium borderline
Srurcontig_10880039620 Alkaloid PMT medium pass
Srurcontig_2300114090 Alkaloid PMT low borderline
Srurcontig_3180152230 Alkaloid PMT medium pass
Srurcontig_3490170990 Alkaloid PMT medium pass
Srurcontig_3520174050 Alkaloid PMT medium pass
Srurcontig_3900192260 Alkaloid PMT medium borderline
Srurcontig_6290318770 Alkaloid PMT medium pass