PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_9680489050 Alkaloid TRI/TRII medium pass
Srurcontig_10040004180 Alkaloid TYDC_DDC medium borderline
Srurcontig_6960350180 Alkaloid TYDC_DDC medium borderline
Srurcontig_6960350210 Alkaloid TYDC_DDC medium borderline
Srurcontig_7400364360 Alkaloid TYDC_DDC low borderline
Srurcontig_9160472010 Alkaloid TYDC_DDC medium borderline
Srurcontig_6230313530 Alkaloid XMT_MXMT_DXMT low borderline
Srurcontig_9160473150 Alkaloid XMT_MXMT_DXMT low borderline
Srurcontig_10050004830 Flavonoid 4CL low borderline
Srurcontig_1030016270 Flavonoid 4CL medium pass
Srurcontig_10630024900 Flavonoid 4CL medium pass
Srurcontig_11170053190 Flavonoid 4CL medium pass
Srurcontig_1870089610 Flavonoid 4CL medium pass
Srurcontig_1980097960 Flavonoid 4CL medium pass
Srurcontig_1980097970 Flavonoid 4CL medium pass
Srurcontig_2130107790 Flavonoid 4CL medium pass
Srurcontig_2170108960 Flavonoid 4CL low borderline
Srurcontig_2890136820 Flavonoid 4CL low borderline
Srurcontig_3420167920 Flavonoid 4CL low borderline
Srurcontig_3490170230 Flavonoid 4CL low borderline
Srurcontig_4130204570 Flavonoid 4CL medium pass
Srurcontig_4130204630 Flavonoid 4CL medium pass
Srurcontig_4130204670 Flavonoid 4CL low borderline
Srurcontig_4130204680 Flavonoid 4CL medium pass
Srurcontig_4390217670 Flavonoid 4CL low borderline
Srurcontig_4710237480 Flavonoid 4CL low borderline
Srurcontig_4750238810 Flavonoid 4CL low borderline
Srurcontig_5350264360 Flavonoid 4CL low borderline
Srurcontig_5430273150 Flavonoid 4CL low borderline
Srurcontig_5530281910 Flavonoid 4CL low borderline
Srurcontig_5560284530 Flavonoid 4CL medium pass
Srurcontig_5560284550 Flavonoid 4CL medium pass
Srurcontig_5560284580 Flavonoid 4CL medium pass
Srurcontig_5560284590 Flavonoid 4CL medium pass
Srurcontig_5560284650 Flavonoid 4CL medium pass
Srurcontig_5560284660 Flavonoid 4CL medium pass
Srurcontig_5660289400 Flavonoid 4CL low borderline
Srurcontig_5790296900 Flavonoid 4CL medium pass
Srurcontig_5810297500 Flavonoid 4CL low borderline
Srurcontig_600303150 Flavonoid 4CL medium pass
Srurcontig_6290317590 Flavonoid 4CL medium pass
Srurcontig_6290319680 Flavonoid 4CL medium pass
Srurcontig_6330323400 Flavonoid 4CL low borderline
Srurcontig_6330324670 Flavonoid 4CL medium pass
Srurcontig_6510332760 Flavonoid 4CL low borderline
Srurcontig_7600390140 Flavonoid 4CL medium pass
Srurcontig_8070413580 Flavonoid 4CL medium pass
Srurcontig_8140418490 Flavonoid 4CL medium pass
Srurcontig_8270423390 Flavonoid 4CL low borderline
Srurcontig_8550439240 Flavonoid 4CL low borderline