PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_630321260 Flavonoid F3H medium borderline
Srurcontig_6330324680 Flavonoid F3H medium borderline
Srurcontig_660339130 Flavonoid F3H medium borderline
Srurcontig_6860347440 Flavonoid F3H low borderline
Srurcontig_7170357170 Flavonoid F3H medium borderline
Srurcontig_7570380040 Flavonoid F3H medium borderline
Srurcontig_8040411930 Flavonoid F3H low borderline
Srurcontig_8040411940 Flavonoid F3H low borderline
Srurcontig_8140418260 Flavonoid F3H low borderline
Srurcontig_8510436920 Flavonoid F3H low borderline
Srurcontig_8760449630 Flavonoid F3H medium borderline
Srurcontig_8840452220 Flavonoid F3H medium borderline
Srurcontig_9010461790 Flavonoid F3H medium borderline
Srurcontig_9020462330 Flavonoid F3H medium borderline
Srurcontig_9760493040 Flavonoid F3H medium borderline
Srurcontig_9870499530 Flavonoid F3H medium borderline
Srurcontig_630321610 Flavonoid FLS medium borderline
Srurcontig_7560378460 Flavonoid FLS low borderline
Srurcontig_10070005630 Flavonoid FNS medium borderline
Srurcontig_10080006870 Flavonoid FNS medium borderline
Srurcontig_10880039670 Flavonoid FNS medium borderline
Srurcontig_2070105740 Flavonoid FNS medium borderline
Srurcontig_2140108440 Flavonoid FNS medium borderline
Srurcontig_2400118440 Flavonoid FNS medium borderline
Srurcontig_2710131080 Flavonoid FNS medium borderline
Srurcontig_3150151070 Flavonoid FNS medium borderline
Srurcontig_3170151730 Flavonoid FNS low borderline
Srurcontig_3490170940 Flavonoid FNS medium borderline
Srurcontig_4150206140 Flavonoid FNS medium borderline
Srurcontig_4610231930 Flavonoid FNS medium borderline
Srurcontig_5040247760 Flavonoid FNS low borderline
Srurcontig_5040247790 Flavonoid FNS medium borderline
Srurcontig_5520279260 Flavonoid FNS low borderline
Srurcontig_5590286720 Flavonoid FNS low borderline
Srurcontig_5660288810 Flavonoid FNS medium borderline
Srurcontig_7260359310 Flavonoid FNS medium borderline
Srurcontig_7270359400 Flavonoid FNS medium borderline
Srurcontig_7920405890 Flavonoid FNS medium borderline
Srurcontig_8380427550 Flavonoid FNS medium pass
Srurcontig_8950457420 Flavonoid FNS medium borderline
Srurcontig_9160472010 Flavonoid FNS medium borderline
Srurcontig_9870498890 Flavonoid FNS low borderline
Srurcontig_9870498930 Flavonoid FNS medium borderline
Srurcontig_9980504260 Flavonoid FNS medium borderline
Srurcontig_10320017260 Flavonoid IFR low borderline
Srurcontig_10370017670 Flavonoid IFR low borderline
Srurcontig_10390018380 Flavonoid IFR low borderline
Srurcontig_10510022520 Flavonoid IFR low borderline
Srurcontig_1070029080 Flavonoid IFR low borderline
Srurcontig_11120051000 Flavonoid IFR low borderline