PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_9300478310 Flavonoid IFS medium borderline
Srurcontig_930476900 Flavonoid IFS medium borderline
Srurcontig_9870498940 Flavonoid IFS medium borderline
Srurcontig_9920501410 Flavonoid IFS low borderline
Srurcontig_9930501490 Flavonoid IFS low borderline
Srurcontig_10150009590 Flavonoid PAL high pass
Srurcontig_10150009680 Flavonoid PAL high pass
Srurcontig_10390018490 Flavonoid PAL high pass
Srurcontig_10390018530 Flavonoid PAL high pass
Srurcontig_10390018590 Flavonoid PAL high pass
Srurcontig_10390018660 Flavonoid PAL high pass
Srurcontig_10920041600 Flavonoid PAL high pass
Srurcontig_11180059000 Flavonoid PAL low borderline
Srurcontig_11180059070 Flavonoid PAL medium pass
Srurcontig_2030101220 Flavonoid PAL high pass
Srurcontig_3040143500 Flavonoid PAL high pass
Srurcontig_3040143520 Flavonoid PAL high pass
Srurcontig_3060145730 Flavonoid PAL high pass
Srurcontig_3060146040 Flavonoid PAL high pass
Srurcontig_3060146050 Flavonoid PAL high pass
Srurcontig_3060146130 Flavonoid PAL high pass
Srurcontig_3350162420 Flavonoid PAL high pass
Srurcontig_3780184190 Flavonoid PAL high pass
Srurcontig_5080248690 Flavonoid PAL high pass
Srurcontig_5080248710 Flavonoid PAL medium pass
Srurcontig_5080248720 Flavonoid PAL high pass
Srurcontig_5080248780 Flavonoid PAL high pass
Srurcontig_5410271260 Flavonoid PAL high pass
Srurcontig_5410271280 Flavonoid PAL high pass
Srurcontig_5520278320 Flavonoid PAL medium pass
Srurcontig_5520278330 Flavonoid PAL medium pass
Srurcontig_5670291270 Flavonoid PAL low borderline
Srurcontig_6070306250 Flavonoid PAL medium pass
Srurcontig_6070306260 Flavonoid PAL medium pass
Srurcontig_6580337220 Flavonoid PAL high pass
Srurcontig_6580337280 Flavonoid PAL high pass
Srurcontig_70350890 Flavonoid PAL medium pass
Srurcontig_7570379040 Flavonoid PAL low borderline
Srurcontig_8140419340 Flavonoid PAL high pass
Srurcontig_850435620 Flavonoid PAL medium pass
Srurcontig_9150471080 Flavonoid PAL high pass
Srurcontig_9360479910 Flavonoid PAL high pass
Srurcontig_10110008790 Flavonoid UFGT medium pass
Srurcontig_10220012970 Flavonoid UFGT medium pass
Srurcontig_10610024000 Flavonoid UFGT medium pass
Srurcontig_1080036850 Flavonoid UFGT medium pass
Srurcontig_1080037250 Flavonoid UFGT medium pass
Srurcontig_11050046640 Flavonoid UFGT medium pass
Srurcontig_11120051710 Flavonoid UFGT high pass
Srurcontig_11120051720 Flavonoid UFGT high pass