PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1236
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Srurcontig_1980096640 Alkaloid 8HGO low borderline
Srurcontig_230113410 Alkaloid 8HGO medium borderline
Srurcontig_3360164670 Alkaloid 8HGO low borderline
Srurcontig_3630177950 Alkaloid 8HGO medium borderline
Srurcontig_4280209300 Alkaloid 8HGO medium borderline
Srurcontig_5140254640 Alkaloid 8HGO medium borderline
Srurcontig_5590285820 Alkaloid 8HGO medium borderline
Srurcontig_7590386410 Alkaloid 8HGO medium borderline
Srurcontig_9790496010 Alkaloid 8HGO medium borderline
Srurcontig_1210063590 Alkaloid ADC medium pass
Srurcontig_2460121660 Alkaloid ADC medium pass
Srurcontig_4840240770 Alkaloid ADC medium pass
Srurcontig_6440329320 Alkaloid ADC medium pass
Srurcontig_10700030760 Alkaloid BBE low borderline
Srurcontig_10700030780 Alkaloid BBE low borderline
Srurcontig_10740033680 Alkaloid BBE low borderline
Srurcontig_3420166590 Alkaloid BBE low borderline
Srurcontig_3520173240 Alkaloid BBE low borderline
Srurcontig_3520173250 Alkaloid BBE low borderline
Srurcontig_3910196140 Alkaloid BBE low borderline
Srurcontig_430210560 Alkaloid BBE low borderline
Srurcontig_5770296540 Alkaloid BBE medium borderline
Srurcontig_5770296580 Alkaloid BBE low borderline
Srurcontig_8280424080 Alkaloid BBE low borderline
Srurcontig_8930456140 Alkaloid BBE low borderline
Srurcontig_930476400 Alkaloid BBE low borderline
Srurcontig_2030103440 Alkaloid CNMT low borderline
Srurcontig_2560126570 Alkaloid CNMT low borderline
Srurcontig_3350162660 Alkaloid CNMT low borderline
Srurcontig_3490170120 Alkaloid CNMT low borderline
Srurcontig_3900190870 Alkaloid CNMT medium borderline
Srurcontig_5430272970 Alkaloid CNMT low borderline
Srurcontig_6210312390 Alkaloid CNMT medium borderline
Srurcontig_10370017790 Alkaloid CODM/T6ODM medium borderline
Srurcontig_10880039630 Alkaloid CODM/T6ODM medium borderline
Srurcontig_10960043970 Alkaloid CODM/T6ODM medium borderline
Srurcontig_11070046930 Alkaloid CODM/T6ODM medium borderline
Srurcontig_120062560 Alkaloid CODM/T6ODM medium borderline
Srurcontig_1700082810 Alkaloid CODM/T6ODM medium borderline
Srurcontig_220109350 Alkaloid CODM/T6ODM medium borderline
Srurcontig_2530123750 Alkaloid CODM/T6ODM medium borderline
Srurcontig_2680128940 Alkaloid CODM/T6ODM medium borderline
Srurcontig_2680128980 Alkaloid CODM/T6ODM medium borderline
Srurcontig_3120150430 Alkaloid CODM/T6ODM medium borderline
Srurcontig_3180152260 Alkaloid CODM/T6ODM medium borderline
Srurcontig_3890187850 Alkaloid CODM/T6ODM medium borderline
Srurcontig_4390218040 Alkaloid CODM/T6ODM medium borderline
Srurcontig_4470220340 Alkaloid CODM/T6ODM medium borderline
Srurcontig_4690235610 Alkaloid CODM/T6ODM medium borderline
Srurcontig_5350263760 Alkaloid CODM/T6ODM medium borderline