PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_5560284550 Rosmarinic Acid 4CL medium pass
Srurcontig_5560284580 Rosmarinic Acid 4CL medium pass
Srurcontig_5560284590 Rosmarinic Acid 4CL medium pass
Srurcontig_5560284650 Rosmarinic Acid 4CL medium pass
Srurcontig_5560284660 Rosmarinic Acid 4CL medium pass
Srurcontig_5660289400 Rosmarinic Acid 4CL low borderline
Srurcontig_5790296900 Rosmarinic Acid 4CL medium pass
Srurcontig_5810297500 Rosmarinic Acid 4CL low borderline
Srurcontig_600303150 Rosmarinic Acid 4CL medium pass
Srurcontig_6290317590 Rosmarinic Acid 4CL medium pass
Srurcontig_6290319680 Rosmarinic Acid 4CL medium pass
Srurcontig_6330323400 Rosmarinic Acid 4CL low borderline
Srurcontig_6330324670 Rosmarinic Acid 4CL medium pass
Srurcontig_6510332760 Rosmarinic Acid 4CL low borderline
Srurcontig_7600390140 Rosmarinic Acid 4CL medium pass
Srurcontig_8070413580 Rosmarinic Acid 4CL medium pass
Srurcontig_8140418490 Rosmarinic Acid 4CL medium pass
Srurcontig_8270423390 Rosmarinic Acid 4CL low borderline
Srurcontig_8550439240 Rosmarinic Acid 4CL low borderline
Srurcontig_8880453410 Rosmarinic Acid 4CL medium pass
Srurcontig_90458990 Rosmarinic Acid 4CL medium pass
Srurcontig_9670487900 Rosmarinic Acid 4CL medium pass
Srurcontig_9870498320 Rosmarinic Acid 4CL medium pass
Srurcontig_9920501380 Rosmarinic Acid 4CL medium pass
Srurcontig_9960503360 Rosmarinic Acid 4CL medium pass
Srurcontig_10030002970 Rosmarinic Acid C4H medium pass
Srurcontig_10090008040 Rosmarinic Acid C4H low borderline
Srurcontig_10090008190 Rosmarinic Acid C4H low borderline
Srurcontig_10320017110 Rosmarinic Acid C4H low borderline
Srurcontig_10320017120 Rosmarinic Acid C4H low borderline
Srurcontig_10370017830 Rosmarinic Acid C4H low borderline
Srurcontig_10370017840 Rosmarinic Acid C4H low borderline
Srurcontig_10490021830 Rosmarinic Acid C4H low borderline
Srurcontig_10490021860 Rosmarinic Acid C4H low borderline
Srurcontig_10490021960 Rosmarinic Acid C4H low borderline
Srurcontig_10530022630 Rosmarinic Acid C4H low borderline
Srurcontig_10560023030 Rosmarinic Acid C4H low borderline
Srurcontig_10580023680 Rosmarinic Acid C4H low borderline
Srurcontig_10840037930 Rosmarinic Acid C4H medium pass
Srurcontig_10870039400 Rosmarinic Acid C4H medium pass
Srurcontig_10960043360 Rosmarinic Acid C4H low borderline
Srurcontig_10960043480 Rosmarinic Acid C4H medium pass
Srurcontig_11180058330 Rosmarinic Acid C4H low borderline
Srurcontig_11180058790 Rosmarinic Acid C4H low borderline
Srurcontig_130068550 Rosmarinic Acid C4H medium pass
Srurcontig_1400071700 Rosmarinic Acid C4H low borderline
Srurcontig_1420075310 Rosmarinic Acid C4H low borderline
Srurcontig_1710083360 Rosmarinic Acid C4H low borderline
Srurcontig_1710083390 Rosmarinic Acid C4H low borderline
Srurcontig_1730084250 Rosmarinic Acid C4H low borderline