PlantSME Plant secondary metabolism enzyme database

Syntrichia ruralis (syntrichia_ruralis)

Imported from atlas release summary for Syntrichia ruralis.

1661
Candidate Protein Records
1236
Pathway-Level Records
3266
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 319 20 BAHD (105) View species results
Phenylpropanoid pathway 317 11 POD (139) View species results
Alkaloid pathway 245 17 NMT (47) View species results
Flavonoid pathway 160 11 UFGT (55) View species results
Rosmarinic acid pathway 124 7 C4H (42) View species results
Steroid pathway 71 12 CAS (28) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1403 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 186 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Srurcontig_8840452040 Alkaloid LAMT medium borderline
Srurcontig_10000001510 Alkaloid MPO medium pass
Srurcontig_5020247000 Alkaloid MPO high pass
Srurcontig_5430274320 Alkaloid MPO low borderline
Srurcontig_5430274330 Alkaloid MPO low borderline
Srurcontig_1070028150 Alkaloid NCS low borderline
Srurcontig_10880039930 Alkaloid NCS medium borderline
Srurcontig_10950043090 Alkaloid NCS medium borderline
Srurcontig_2740132540 Alkaloid NCS low borderline
Srurcontig_3670178320 Alkaloid NCS low borderline
Srurcontig_4070201770 Alkaloid NCS low borderline
Srurcontig_4310211080 Alkaloid NCS medium borderline
Srurcontig_4570227250 Alkaloid NCS medium borderline
Srurcontig_5410271900 Alkaloid NCS low borderline
Srurcontig_6670341650 Alkaloid NCS low borderline
Srurcontig_8140418260 Alkaloid NCS medium borderline
Srurcontig_8160419640 Alkaloid NCS low borderline
Srurcontig_10030002720 Alkaloid NMT low borderline
Srurcontig_10080005920 Alkaloid NMT medium pass
Srurcontig_10160010100 Alkaloid NMT low borderline
Srurcontig_10250015070 Alkaloid NMT low borderline
Srurcontig_1030016410 Alkaloid NMT low borderline
Srurcontig_10380018130 Alkaloid NMT medium pass
Srurcontig_10630024730 Alkaloid NMT medium pass
Srurcontig_10700031340 Alkaloid NMT low borderline
Srurcontig_1080036180 Alkaloid NMT medium pass
Srurcontig_1080036220 Alkaloid NMT medium pass
Srurcontig_1080037210 Alkaloid NMT medium pass
Srurcontig_10830037790 Alkaloid NMT low borderline
Srurcontig_11080047870 Alkaloid NMT medium pass
Srurcontig_11110049230 Alkaloid NMT medium borderline
Srurcontig_11120050420 Alkaloid NMT low borderline
Srurcontig_11120051190 Alkaloid NMT medium pass
Srurcontig_11180059980 Alkaloid NMT medium pass
Srurcontig_11190060080 Alkaloid NMT medium pass
Srurcontig_1170062200 Alkaloid NMT medium borderline
Srurcontig_1290066690 Alkaloid NMT medium pass
Srurcontig_1310069150 Alkaloid NMT low borderline
Srurcontig_1420075550 Alkaloid NMT medium pass
Srurcontig_1610079850 Alkaloid NMT low borderline
Srurcontig_1720083740 Alkaloid NMT low borderline
Srurcontig_1720083770 Alkaloid NMT low borderline
Srurcontig_1830086370 Alkaloid NMT medium borderline
Srurcontig_1870089790 Alkaloid NMT medium pass
Srurcontig_1880089930 Alkaloid NMT low borderline
Srurcontig_2030101160 Alkaloid NMT medium pass
Srurcontig_2030104190 Alkaloid NMT medium pass
Srurcontig_2200110390 Alkaloid NMT low borderline
Srurcontig_2340115340 Alkaloid NMT low borderline
Srurcontig_2430119570 Alkaloid NMT low borderline