PlantSME Plant secondary metabolism enzyme database

Arabis alpina (arabis_alpina)

Imported from atlas release summary for Arabis alpina.

1406
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 426 19 BAHD (197) View species results
Alkaloid pathway 322 18 SGD (62) View species results
Phenylpropanoid pathway 264 11 POD (121) View species results
Flavonoid pathway 175 9 UFGT (116) View species results
Rosmarinic acid pathway 113 7 C4H (48) View species results
Steroid pathway 106 13 SMT1/SMT2/SMT3 (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1300 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 285 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Aalp05G0004710 Rosmarinic Acid C4H low borderline
Aalp05G0006600 Rosmarinic Acid C4H medium pass
Aalp05G0010760 Rosmarinic Acid C4H low borderline
Aalp05G0010770 Rosmarinic Acid C4H low borderline
Aalp05G0020020 Rosmarinic Acid C4H low borderline
Aalp05G0020290 Rosmarinic Acid C4H medium pass
Aalp05G0020310 Rosmarinic Acid C4H low borderline
Aalp05G0020320 Rosmarinic Acid C4H medium pass
Aalp05G0020330 Rosmarinic Acid C4H medium pass
Aalp05G0031660 Rosmarinic Acid C4H low borderline
Aalp05G0032720 Rosmarinic Acid C4H low borderline
Aalp06G0006540 Rosmarinic Acid C4H low borderline
Aalp06G0010140 Rosmarinic Acid C4H medium pass
Aalp06G0010190 Rosmarinic Acid C4H low borderline
Aalp06G0010200 Rosmarinic Acid C4H medium pass
Aalp06G0010210 Rosmarinic Acid C4H medium pass
Aalp06G0014330 Rosmarinic Acid C4H low borderline
Aalp06G0016790 Rosmarinic Acid C4H low borderline
Aalp06G0019490 Rosmarinic Acid C4H low borderline
Aalp06G0026140 Rosmarinic Acid C4H low borderline
Aalp06G0026250 Rosmarinic Acid C4H low borderline
Aalp06G0026280 Rosmarinic Acid C4H low borderline
Aalp06G0026290 Rosmarinic Acid C4H low borderline
Aalp06G0026500 Rosmarinic Acid C4H low borderline
Aalp06G0028370 Rosmarinic Acid C4H low borderline
Aalp06G0029920 Rosmarinic Acid C4H low borderline
Aalp06G0029930 Rosmarinic Acid C4H low borderline
Aalp06G0029940 Rosmarinic Acid C4H low borderline
Aalp07G0001430 Rosmarinic Acid C4H low borderline
Aalp07G0002000 Rosmarinic Acid C4H low borderline
Aalp07G0003040 Rosmarinic Acid C4H low borderline
Aalp07G0003050 Rosmarinic Acid C4H low borderline
Aalp07G0003080 Rosmarinic Acid C4H medium pass
Aalp07G0003110 Rosmarinic Acid C4H low borderline
Aalp07G0003120 Rosmarinic Acid C4H medium pass
Aalp07G0003130 Rosmarinic Acid C4H medium pass
Aalp07G0003140 Rosmarinic Acid C4H low borderline
Aalp07G0003150 Rosmarinic Acid C4H low borderline
Aalp07G0004270 Rosmarinic Acid C4H low borderline
Aalp07G0004380 Rosmarinic Acid C4H medium pass
Aalp07G0006540 Rosmarinic Acid C4H medium pass
Aalp07G0011110 Rosmarinic Acid C4H low borderline
Aalp07G0011120 Rosmarinic Acid C4H medium pass
Aalp07G0012240 Rosmarinic Acid C4H low borderline
Aalp07G0013300 Rosmarinic Acid C4H low borderline
Aalp07G0019330 Rosmarinic Acid C4H low borderline
Aalp07G0021790 Rosmarinic Acid C4H medium pass
Aalp07G0028160 Rosmarinic Acid C4H low borderline
Aalp07G0032830 Rosmarinic Acid C4H medium pass
Aalp07G0037270 Rosmarinic Acid C4H medium pass