PlantSME Plant secondary metabolism enzyme database

Arabis alpina (arabis_alpina)

Imported from atlas release summary for Arabis alpina.

1692
Candidate Protein Records
1406
Pathway-Level Records
3402
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 426 19 BAHD (197) View species results
Alkaloid pathway 322 18 SGD (62) View species results
Phenylpropanoid pathway 264 11 POD (121) View species results
Flavonoid pathway 175 9 UFGT (116) View species results
Rosmarinic acid pathway 113 7 C4H (48) View species results
Steroid pathway 106 13 SMT1/SMT2/SMT3 (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1300 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 285 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Aalp04G0032150 Rosmarinic Acid PAL high pass
Aalp05G0020270 Rosmarinic Acid PAL high pass
Aalp08G0004280 Rosmarinic Acid PAL high pass
Aalpscaffold_1550002400 Rosmarinic Acid PAL high pass
Aalp01G0002990 Rosmarinic Acid RAS medium pass
Aalp01G0026620 Rosmarinic Acid RAS low borderline
Aalp01G0035450 Rosmarinic Acid RAS low borderline
Aalp01G0036780 Rosmarinic Acid RAS low borderline
Aalp02G0026230 Rosmarinic Acid RAS low borderline
Aalp03G0005310 Rosmarinic Acid RAS medium pass
Aalp03G0026630 Rosmarinic Acid RAS low borderline
Aalp03G0026650 Rosmarinic Acid RAS low borderline
Aalp03G0034760 Rosmarinic Acid RAS low borderline
Aalp03G0036270 Rosmarinic Acid RAS low borderline
Aalp03G0037810 Rosmarinic Acid RAS medium pass
Aalp04G0024530 Rosmarinic Acid RAS low borderline
Aalp04G0037040 Rosmarinic Acid RAS low borderline
Aalp04G0042810 Rosmarinic Acid RAS low borderline
Aalp05G0008590 Rosmarinic Acid RAS low borderline
Aalp05G0011230 Rosmarinic Acid RAS low borderline
Aalp05G0017140 Rosmarinic Acid RAS low borderline
Aalp05G0024020 Rosmarinic Acid RAS low borderline
Aalp06G0015370 Rosmarinic Acid RAS low borderline
Aalp06G0033470 Rosmarinic Acid RAS medium pass
Aalp07G0004910 Rosmarinic Acid RAS low borderline
Aalp07G0006240 Rosmarinic Acid RAS low borderline
Aalp07G0010240 Rosmarinic Acid RAS low borderline
Aalp07G0017220 Rosmarinic Acid RAS low borderline
Aalp07G0032760 Rosmarinic Acid RAS low borderline
Aalp08G0007860 Rosmarinic Acid RAS low borderline
Aalp08G0040700 Rosmarinic Acid RAS medium pass
Aalp08G0040710 Rosmarinic Acid RAS medium pass
Aalp08G0042290 Rosmarinic Acid RAS low borderline
Aalp08G0053650 Rosmarinic Acid RAS low borderline
Aalp01G0016210 Rosmarinic Acid TAT low borderline
Aalp01G0032590 Rosmarinic Acid TAT medium pass
Aalp01G0032600 Rosmarinic Acid TAT low borderline
Aalp01G0039560 Rosmarinic Acid TAT low borderline
Aalp02G0015600 Rosmarinic Acid TAT low borderline
Aalp02G0030080 Rosmarinic Acid TAT medium pass
Aalp03G0034390 Rosmarinic Acid TAT low borderline
Aalp03G0039450 Rosmarinic Acid TAT medium pass
Aalp03G0039460 Rosmarinic Acid TAT medium pass
Aalp04G0010550 Rosmarinic Acid TAT medium pass
Aalp04G0011920 Rosmarinic Acid TAT medium pass
Aalp04G0014020 Rosmarinic Acid TAT medium pass
Aalp04G0014070 Rosmarinic Acid TAT low borderline
Aalp04G0014110 Rosmarinic Acid TAT medium pass
Aalp04G0018210 Rosmarinic Acid TAT medium pass
Aalp04G0036630 Rosmarinic Acid TAT low borderline