PlantSME Plant secondary metabolism enzyme database

Aulacomnium turgidum (aulacomnium_turgidum)

Imported from atlas release summary for Aulacomnium turgidum.

700
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 11 POD (96) View species results
Terpenoid pathway 156 19 BAHD (65) View species results
Alkaloid pathway 155 18 NMT (35) View species results
Flavonoid pathway 90 9 CHS (22) View species results
Rosmarinic acid pathway 80 7 C4H (35) View species results
Steroid pathway 36 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 719 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 125 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
Aturscaffold_100027660 Alkaloid GS low borderline
Aturscaffold_100033480 Alkaloid GS low borderline
Aturscaffold_100041020 Alkaloid GS medium pass
Aturscaffold_100048240 Alkaloid GS low borderline
Aturscaffold_10004950 Alkaloid GS high pass
Aturscaffold_10004960 Alkaloid GS high pass
Aturscaffold_10006320 Alkaloid GS high pass
Aturscaffold_10011720 Alkaloid GS low borderline
Aturscaffold_10013440 Alkaloid GS low borderline
Aturscaffold_10015940 Alkaloid GS low borderline
Aturscaffold_10021880 Alkaloid GS high pass
Aturscaffold_10025230 Alkaloid GS low borderline
Aturscaffold_10026060 Alkaloid GS medium pass
Aturscaffold_120075900 Alkaloid GS low borderline
Aturscaffold_20078550 Alkaloid GS low borderline
Aturscaffold_20078560 Alkaloid GS medium pass
Aturscaffold_20082580 Alkaloid GS medium pass
Aturscaffold_20082790 Alkaloid GS medium pass
Aturscaffold_20087360 Alkaloid GS medium pass
Aturscaffold_20096580 Alkaloid GS high pass
Aturscaffold_30114280 Alkaloid GS low borderline
Aturscaffold_30117000 Alkaloid GS medium pass
Aturscaffold_40123480 Alkaloid GS low borderline
Aturscaffold_40127410 Alkaloid GS medium pass
Aturscaffold_40140470 Alkaloid GS low borderline
Aturscaffold_40152900 Alkaloid GS low borderline
Aturscaffold_40152920 Alkaloid GS low borderline
Aturscaffold_40162540 Alkaloid GS low borderline
Aturscaffold_40173250 Alkaloid GS low borderline
Aturscaffold_40174880 Alkaloid GS low borderline
Aturscaffold_50180990 Alkaloid GS low borderline
Aturscaffold_50196790 Alkaloid GS low borderline
Aturscaffold_70226380 Alkaloid GS low borderline
Aturscaffold_70231860 Alkaloid GS high pass
Aturscaffold_70244390 Alkaloid GS low borderline
Aturscaffold_70256160 Alkaloid GS high pass
Aturscaffold_80273670 Alkaloid GS low borderline
Aturscaffold_80298390 Alkaloid GS low borderline
Aturscaffold_80308390 Alkaloid GS low borderline
Aturscaffold_90328340 Alkaloid GS low borderline