PlantSME Plant secondary metabolism enzyme database

Aulacomnium turgidum (aulacomnium_turgidum)

Imported from atlas release summary for Aulacomnium turgidum.

700
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 11 POD (96) View species results
Terpenoid pathway 156 19 BAHD (65) View species results
Alkaloid pathway 155 18 NMT (35) View species results
Flavonoid pathway 90 9 CHS (22) View species results
Rosmarinic acid pathway 80 7 C4H (35) View species results
Steroid pathway 36 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 719 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 125 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Aturscaffold_10001410 Alkaloid T3O medium borderline
Aturscaffold_100043020 Alkaloid T3O medium pass
Aturscaffold_20079830 Alkaloid T3O medium pass
Aturscaffold_20086760 Alkaloid T3O medium pass
Aturscaffold_20090220 Alkaloid T3O medium pass
Aturscaffold_20092810 Alkaloid T3O medium borderline
Aturscaffold_20099320 Alkaloid T3O medium borderline
Aturscaffold_30111610 Alkaloid T3O medium borderline
Aturscaffold_30111640 Alkaloid T3O medium borderline
Aturscaffold_30114550 Alkaloid T3O medium pass
Aturscaffold_30118530 Alkaloid T3O medium borderline
Aturscaffold_40126450 Alkaloid T3O medium borderline
Aturscaffold_40147260 Alkaloid T3O medium borderline
Aturscaffold_40154100 Alkaloid T3O medium borderline
Aturscaffold_40161060 Alkaloid T3O medium borderline
Aturscaffold_40161390 Alkaloid T3O medium borderline
Aturscaffold_40161410 Alkaloid T3O medium borderline
Aturscaffold_40162210 Alkaloid T3O medium borderline
Aturscaffold_50189250 Alkaloid T3O medium borderline
Aturscaffold_50192960 Alkaloid T3O medium borderline
Aturscaffold_60200150 Alkaloid T3O medium borderline
Aturscaffold_60211690 Alkaloid T3O high pass
Aturscaffold_60214280 Alkaloid T3O medium pass
Aturscaffold_60217650 Alkaloid T3O medium borderline
Aturscaffold_70228020 Alkaloid T3O medium pass
Aturscaffold_70237670 Alkaloid T3O medium pass
Aturscaffold_70238160 Alkaloid T3O medium borderline
Aturscaffold_80267270 Alkaloid T3O low borderline
Aturscaffold_80267410 Alkaloid T3O medium pass
Aturscaffold_80267440 Alkaloid T3O low borderline
Aturscaffold_80271860 Alkaloid T3O medium borderline
Aturscaffold_80272690 Alkaloid T3O medium borderline
Aturscaffold_80281820 Alkaloid T3O low borderline
Aturscaffold_80281850 Alkaloid T3O low borderline
Aturscaffold_80285610 Alkaloid T3O medium borderline
Aturscaffold_80294650 Alkaloid T3O medium borderline
Aturscaffold_80306520 Alkaloid T3O medium borderline
Aturscaffold_90312700 Alkaloid T3O medium pass
Aturscaffold_90321160 Alkaloid T3O medium pass
Aturscaffold_90321180 Alkaloid T3O medium pass
Aturscaffold_90322170 Alkaloid T3O medium borderline
Aturscaffold_90322180 Alkaloid T3O medium borderline
Aturscaffold_90322190 Alkaloid T3O medium borderline
Aturscaffold_90322210 Alkaloid T3O medium borderline
Aturscaffold_90333320 Alkaloid T3O medium borderline