PlantSME Plant secondary metabolism enzyme database

Aulacomnium turgidum (aulacomnium_turgidum)

Imported from atlas release summary for Aulacomnium turgidum.

700
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 11 POD (96) View species results
Terpenoid pathway 156 19 BAHD (65) View species results
Alkaloid pathway 155 18 NMT (35) View species results
Flavonoid pathway 90 9 CHS (22) View species results
Rosmarinic acid pathway 80 7 C4H (35) View species results
Steroid pathway 36 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 719 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 125 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Aturscaffold_10002250 Rosmarinic Acid 4CL low borderline
Aturscaffold_100041790 Rosmarinic Acid 4CL low borderline
Aturscaffold_100055790 Rosmarinic Acid 4CL medium pass
Aturscaffold_10006310 Rosmarinic Acid 4CL medium pass
Aturscaffold_10017020 Rosmarinic Acid 4CL low borderline
Aturscaffold_20096820 Rosmarinic Acid 4CL medium pass
Aturscaffold_30104610 Rosmarinic Acid 4CL low borderline
Aturscaffold_40147140 Rosmarinic Acid 4CL medium pass
Aturscaffold_40148080 Rosmarinic Acid 4CL low borderline
Aturscaffold_40155800 Rosmarinic Acid 4CL low borderline
Aturscaffold_40156560 Rosmarinic Acid 4CL medium pass
Aturscaffold_40163920 Rosmarinic Acid 4CL medium pass
Aturscaffold_40169650 Rosmarinic Acid 4CL medium pass
Aturscaffold_60203780 Rosmarinic Acid 4CL medium pass
Aturscaffold_70231740 Rosmarinic Acid 4CL low borderline
Aturscaffold_70235500 Rosmarinic Acid 4CL low borderline
Aturscaffold_70236300 Rosmarinic Acid 4CL medium pass
Aturscaffold_70237610 Rosmarinic Acid 4CL low borderline
Aturscaffold_70247020 Rosmarinic Acid 4CL low borderline
Aturscaffold_80267590 Rosmarinic Acid 4CL medium pass
Aturscaffold_80270810 Rosmarinic Acid 4CL medium pass
Aturscaffold_80271870 Rosmarinic Acid 4CL medium pass
Aturscaffold_80288230 Rosmarinic Acid 4CL low borderline
Aturscaffold_80306390 Rosmarinic Acid 4CL low borderline
Aturscaffold_80310390 Rosmarinic Acid 4CL low borderline
Aturscaffold_90326980 Rosmarinic Acid 4CL low borderline
Aturscaffold_10001300 Rosmarinic Acid C4H low borderline
Aturscaffold_10001410 Rosmarinic Acid C4H medium pass
Aturscaffold_10001520 Rosmarinic Acid C4H low borderline
Aturscaffold_10001620 Rosmarinic Acid C4H low borderline
Aturscaffold_10001760 Rosmarinic Acid C4H low borderline
Aturscaffold_100035370 Rosmarinic Acid C4H low borderline
Aturscaffold_100043020 Rosmarinic Acid C4H low borderline
Aturscaffold_100044040 Rosmarinic Acid C4H medium pass
Aturscaffold_100045060 Rosmarinic Acid C4H medium pass
Aturscaffold_100046700 Rosmarinic Acid C4H low borderline
Aturscaffold_100052140 Rosmarinic Acid C4H medium pass
Aturscaffold_10010290 Rosmarinic Acid C4H low borderline
Aturscaffold_10023510 Rosmarinic Acid C4H low borderline
Aturscaffold_120075980 Rosmarinic Acid C4H low borderline
Aturscaffold_20079830 Rosmarinic Acid C4H low borderline
Aturscaffold_20084890 Rosmarinic Acid C4H low borderline
Aturscaffold_20084900 Rosmarinic Acid C4H low borderline
Aturscaffold_20086730 Rosmarinic Acid C4H medium pass
Aturscaffold_20086760 Rosmarinic Acid C4H low borderline
Aturscaffold_20089510 Rosmarinic Acid C4H medium pass
Aturscaffold_20090180 Rosmarinic Acid C4H low borderline
Aturscaffold_20090220 Rosmarinic Acid C4H low borderline
Aturscaffold_20092220 Rosmarinic Acid C4H low borderline
Aturscaffold_20092800 Rosmarinic Acid C4H low borderline