Aulacomnium turgidum (aulacomnium_turgidum)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 26.14% Terpenoid pathway 22.29% Alkaloid pathway 22.14% Flavonoid pathway 12.86% Rosmarinic acid pathway 11.43% Steroid pathway 5.14%

Family Distribution

700 Candidate Genes

C4H 6.84% C3'H/CYP98A 5.97% POD 5.64% BAHD 5.48% NMT 5.37% CYP76 4.94% 4CL 4.23% IFS 3.09%

Other Families 58.44%

More Families (96)

PAL 54 2.93% BR6OX2/CYP85A2 47 2.55% T3O 45 2.44% GS 40 2.17% STR 40 2.17% F3H 39 2.12% DWF4/CYP90B1 39 2.12% IFR 38 2.06% F3'H/CYP75B 35 1.9% PYKS 33 1.79% CAD 26 1.41% UGT 26 1.41% 7DLGT 24 1.3% CHS 24 1.3% CODM/T6ODM 23 1.25% SMT1/SMT2/SMT3 23 1.25% UFGT 22 1.19% IO 21 1.14% F3'5'H/CYP75A 20 1.09% H6H 19 1.03% TRI/TRII 19 1.03% COMT 17 0.92% CYP71 17 0.92% G8O/G8H 16 0.87% T16H 16 0.87% CYP90D1 14 0.76% HCT 13 0.71% CAS 13 0.71% FNS 12 0.65% LAC 11 0.6% RAS 11 0.6% SLS 10 0.54% SGD 10 0.54% 7DLH 10 0.54% CNMT 9 0.49% MPO 9 0.49% ANR 9 0.49% CSE 9 0.49% NCS 8 0.43% CCR 8 0.43% CPD/CYP90A1 8 0.43% BBE 7 0.38% LAMT 7 0.38% 8HGO 7 0.38% COR 7 0.38% CYP80B1 7 0.38% F5H/CYP84A 7 0.38% TAT 7 0.38% SQS/FDFT1 7 0.38% BR6OX1/CYP85A1 7 0.38% TDC 6 0.33% PMT 6 0.33% DFR 6 0.33% CPR 6 0.33% AACT 6 0.33% 16OMT 5 0.27% CYP80F1 5 0.27% ROT3/CYP90C1 5 0.27% CHI 4 0.22% DWF5 4 0.22% GGPPS 4 0.22% CYP719 3 0.16% ANS/LDOX 3 0.16% FLS 3 0.16% CYP51G1 3 0.16% SQE 3 0.16% DET2 3 0.16% IDI 3 0.16% MVD 3 0.16% FPPS 3 0.16% MVK 3 0.16% TYDC_DDC 2 0.11% ADC 2 0.11% ISY 2 0.11% GES 2 0.11% CCoAOMT 2 0.11% SMO1/SMO2 2 0.11% HYD1 2 0.11% CPI1 2 0.11% MDS/IspF 2 0.11% HDR/IspH 2 0.11% DXR 2 0.11% HDS/IspG 2 0.11% HMGR 2 0.11% DXS 2 0.11% TPS 2 0.11% 6OMT_4OMT_SOMT 1 0.05% HPPR 1 0.05% FK 1 0.05% DWF1 1 0.05% DWF7 1 0.05% CMK/IspE 1 0.05% MCT/IspD 1 0.05% PMK 1 0.05% HMGS 1 0.05% GPPS 1 0.05%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	183	11	POD (96)	View species results
Terpenoid pathway	156	19	BAHD (65)	View species results
Alkaloid pathway	155	18	NMT (35)	View species results
Flavonoid pathway	90	9	CHS (22)	View species results
Rosmarinic acid pathway	80	7	C4H (35)	View species results
Steroid pathway	36	13	CAS (10)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	719	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	125	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: SMT1/SMT2/SMT3

Gene	Pathway	Family	Confidence	Status	Best Target
Aturscaffold_100042610	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_100055110	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00001__sp_H2E7T8_SMTL1_BOTBR
Aturscaffold_10007190	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_110066470	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
Aturscaffold_110069540	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00002__sp_H2E7T9_SMTL2_BOTBR
Aturscaffold_20080040	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_20085070	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Aturscaffold_40129150	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Aturscaffold_40165760	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_50180950	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_50182940	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_50188120	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
Aturscaffold_50191970	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_50195480	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_60200740	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
Aturscaffold_60202340	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_70227580	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_70229250	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_70260910	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_70260920	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_80275440	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Aturscaffold_80275740	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Aturscaffold_80302730	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH