PlantSME Plant secondary metabolism enzyme database

Aulacomnium turgidum (aulacomnium_turgidum)

Imported from atlas release summary for Aulacomnium turgidum.

700
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 11 POD (96) View species results
Terpenoid pathway 156 19 BAHD (65) View species results
Alkaloid pathway 155 18 NMT (35) View species results
Flavonoid pathway 90 9 CHS (22) View species results
Rosmarinic acid pathway 80 7 C4H (35) View species results
Steroid pathway 36 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 719 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 125 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
Aturscaffold_100044790 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_10005120 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_10024010 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_20078020 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_20079190 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_40134620 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_40134640 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_50180280 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_50180290 Flavonoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_50180320 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_50180350 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_60217940 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_80284210 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_90314010 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_90315750 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_90315790 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_90316450 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_90318790 Flavonoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_100044790 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_10005120 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_10024010 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_20078020 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_20079190 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_40134620 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_40134640 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_50180280 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_50180290 Phenylpropanoid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_50180320 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_50180350 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_60217940 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_80284210 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_90314010 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_90315750 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_90315790 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_90316450 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_90318790 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_100044790 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_10005120 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_10024010 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_20078020 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_20079190 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_40134620 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_40134640 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_50180280 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_50180290 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_50180320 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_50180350 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Aturscaffold_60217940 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_80284210 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Aturscaffold_90314010 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH