PlantSME Plant secondary metabolism enzyme database

Aulacomnium turgidum (aulacomnium_turgidum)

Imported from atlas release summary for Aulacomnium turgidum.

700
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 11 POD (96) View species results
Terpenoid pathway 156 19 BAHD (65) View species results
Alkaloid pathway 155 18 NMT (35) View species results
Flavonoid pathway 90 9 CHS (22) View species results
Rosmarinic acid pathway 80 7 C4H (35) View species results
Steroid pathway 36 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 719 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 125 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Aturscaffold_100048320 Alkaloid BBE low borderline
Aturscaffold_40133540 Alkaloid BBE low borderline
Aturscaffold_40133550 Alkaloid BBE low borderline
Aturscaffold_40134150 Alkaloid BBE low borderline
Aturscaffold_40139500 Alkaloid BBE low borderline
Aturscaffold_40144400 Alkaloid BBE low borderline
Aturscaffold_10000930 Alkaloid CNMT medium borderline
Aturscaffold_100032620 Alkaloid CNMT low borderline
Aturscaffold_110068520 Alkaloid CNMT low borderline
Aturscaffold_20085070 Alkaloid CNMT low borderline
Aturscaffold_20086420 Alkaloid CNMT low borderline
Aturscaffold_40138860 Alkaloid CNMT low borderline
Aturscaffold_70253980 Alkaloid CNMT low borderline
Aturscaffold_70260890 Alkaloid CNMT low borderline
Aturscaffold_80303430 Alkaloid CNMT low borderline
Aturscaffold_100033260 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_10004930 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_10024530 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_20100530 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_30103800 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_40160840 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_40162170 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_40171150 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_50196100 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_70226570 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_70226620 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_70226630 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_70240690 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_70261910 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_80265930 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_80291100 Alkaloid CODM/T6ODM low borderline
Aturscaffold_90314870 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_90314890 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_90315240 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_90315310 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_90317890 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_90331850 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_90332880 Alkaloid CODM/T6ODM medium borderline
Aturscaffold_100038070 Alkaloid COR medium pass
Aturscaffold_40145960 Alkaloid COR medium pass
Aturscaffold_40146070 Alkaloid COR medium pass
Aturscaffold_70251230 Alkaloid COR medium pass
Aturscaffold_80296510 Alkaloid COR medium pass
Aturscaffold_80311520 Alkaloid COR medium pass
Aturscaffold_90317530 Alkaloid COR medium pass
Aturscaffold_100047330 Alkaloid CYP719 low borderline
Aturscaffold_40131710 Alkaloid CYP719 low borderline
Aturscaffold_50192970 Alkaloid CYP719 low borderline
Aturscaffold_20089510 Alkaloid CYP80B1 medium borderline
Aturscaffold_40162190 Alkaloid CYP80B1 low borderline