PlantSME Plant secondary metabolism enzyme database

Aulacomnium turgidum (aulacomnium_turgidum)

Imported from atlas release summary for Aulacomnium turgidum.

700
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 11 POD (96) View species results
Terpenoid pathway 156 19 BAHD (65) View species results
Alkaloid pathway 155 18 NMT (35) View species results
Flavonoid pathway 90 9 CHS (22) View species results
Rosmarinic acid pathway 80 7 C4H (35) View species results
Steroid pathway 36 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 719 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 125 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Aturscaffold_70223590 Alkaloid IO medium borderline
Aturscaffold_70227660 Alkaloid IO low borderline
Aturscaffold_70235340 Alkaloid IO medium borderline
Aturscaffold_70260470 Alkaloid IO medium borderline
Aturscaffold_80267250 Alkaloid IO low borderline
Aturscaffold_80291810 Alkaloid IO low borderline
Aturscaffold_90317060 Alkaloid IO medium borderline
Aturscaffold_90323480 Alkaloid IO medium pass
Aturscaffold_70259450 Alkaloid ISY medium pass
Aturscaffold_70260010 Alkaloid ISY medium pass
Aturscaffold_100035670 Alkaloid LAMT low borderline
Aturscaffold_40144680 Alkaloid LAMT medium borderline
Aturscaffold_40155560 Alkaloid LAMT low borderline
Aturscaffold_40167170 Alkaloid LAMT medium pass
Aturscaffold_90333870 Alkaloid LAMT medium borderline
Aturscaffold_90334240 Alkaloid LAMT medium pass
Aturscaffold_90334270 Alkaloid LAMT medium borderline
Aturscaffold_10007580 Alkaloid MPO medium pass
Aturscaffold_110062290 Alkaloid MPO low borderline
Aturscaffold_110062850 Alkaloid MPO low borderline
Aturscaffold_110067790 Alkaloid MPO low borderline
Aturscaffold_110071400 Alkaloid MPO low borderline
Aturscaffold_30109480 Alkaloid MPO high pass
Aturscaffold_30121170 Alkaloid MPO medium pass
Aturscaffold_40176140 Alkaloid MPO low borderline
Aturscaffold_60211810 Alkaloid MPO high pass
Aturscaffold_10008380 Alkaloid NCS medium borderline
Aturscaffold_40158300 Alkaloid NCS medium borderline
Aturscaffold_50181180 Alkaloid NCS medium borderline
Aturscaffold_70223200 Alkaloid NCS medium borderline
Aturscaffold_70246120 Alkaloid NCS low borderline
Aturscaffold_70246280 Alkaloid NCS low borderline
Aturscaffold_80285360 Alkaloid NCS low borderline
Aturscaffold_90315360 Alkaloid NCS medium borderline
Aturscaffold_10000160 Alkaloid NMT low borderline
Aturscaffold_10002030 Alkaloid NMT medium borderline
Aturscaffold_100032070 Alkaloid NMT low borderline
Aturscaffold_10003230 Alkaloid NMT medium pass
Aturscaffold_100033670 Alkaloid NMT low borderline
Aturscaffold_100034250 Alkaloid NMT low borderline
Aturscaffold_100034540 Alkaloid NMT medium pass
Aturscaffold_100036880 Alkaloid NMT medium borderline
Aturscaffold_100048830 Alkaloid NMT medium pass
Aturscaffold_100048850 Alkaloid NMT medium pass
Aturscaffold_100055990 Alkaloid NMT low borderline
Aturscaffold_10006330 Alkaloid NMT medium pass
Aturscaffold_10009510 Alkaloid NMT low borderline
Aturscaffold_10009520 Alkaloid NMT low borderline
Aturscaffold_10009860 Alkaloid NMT medium borderline
Aturscaffold_10014640 Alkaloid NMT low borderline