PlantSME Plant secondary metabolism enzyme database

Aulacomnium turgidum (aulacomnium_turgidum)

Imported from atlas release summary for Aulacomnium turgidum.

700
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 11 POD (96) View species results
Terpenoid pathway 156 19 BAHD (65) View species results
Alkaloid pathway 155 18 NMT (35) View species results
Flavonoid pathway 90 9 CHS (22) View species results
Rosmarinic acid pathway 80 7 C4H (35) View species results
Steroid pathway 36 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 719 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 125 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Aturscaffold_80286100 Terpenoid CYP76 medium pass
Aturscaffold_80294650 Terpenoid CYP76 medium borderline
Aturscaffold_80296920 Terpenoid CYP76 medium pass
Aturscaffold_80306520 Terpenoid CYP76 medium borderline
Aturscaffold_80312350 Terpenoid CYP76 medium borderline
Aturscaffold_90312700 Terpenoid CYP76 low borderline
Aturscaffold_90317060 Terpenoid CYP76 medium pass
Aturscaffold_90321160 Terpenoid CYP76 low borderline
Aturscaffold_90322170 Terpenoid CYP76 medium borderline
Aturscaffold_90322180 Terpenoid CYP76 medium borderline
Aturscaffold_90322190 Terpenoid CYP76 medium borderline
Aturscaffold_90322210 Terpenoid CYP76 medium borderline
Aturscaffold_90323480 Terpenoid CYP76 low borderline
Aturscaffold_90323670 Terpenoid CYP76 medium borderline
Aturscaffold_90330490 Terpenoid CYP76 medium borderline
Aturscaffold_90333320 Terpenoid CYP76 medium borderline
Aturscaffold_30114990 Terpenoid DXR high pass
Aturscaffold_60209510 Terpenoid DXR high pass
Aturscaffold_70234840 Terpenoid DXS medium pass
Aturscaffold_80266410 Terpenoid DXS low borderline
Aturscaffold_20096990 Terpenoid FPPS medium pass
Aturscaffold_30115830 Terpenoid FPPS low borderline
Aturscaffold_60207550 Terpenoid FPPS medium pass
Aturscaffold_40174620 Terpenoid GGPPS medium borderline
Aturscaffold_70254690 Terpenoid GGPPS medium borderline
Aturscaffold_80308420 Terpenoid GGPPS medium borderline
Aturscaffold_90331360 Terpenoid GGPPS medium borderline
Aturscaffold_80266490 Terpenoid GPPS low borderline
Aturscaffold_20078990 Terpenoid HDR/IspH high pass
Aturscaffold_60198520 Terpenoid HDR/IspH high pass
Aturscaffold_40155420 Terpenoid HDS/IspG high pass
Aturscaffold_80268220 Terpenoid HDS/IspG high pass
Aturscaffold_70231530 Terpenoid HMGR low borderline
Aturscaffold_70235760 Terpenoid HMGR medium pass
Aturscaffold_70227350 Terpenoid HMGS high pass
Aturscaffold_110072160 Terpenoid IDI low borderline
Aturscaffold_20092170 Terpenoid IDI medium pass
Aturscaffold_60220210 Terpenoid IDI low borderline
Aturscaffold_60208210 Terpenoid MCT/IspD high pass
Aturscaffold_100037250 Terpenoid MDS/IspF high pass
Aturscaffold_40154220 Terpenoid MDS/IspF low borderline
Aturscaffold_110075000 Terpenoid MVD low borderline
Aturscaffold_80304570 Terpenoid MVD low borderline
Aturscaffold_90329930 Terpenoid MVD medium pass
Aturscaffold_50186100 Terpenoid MVK medium pass
Aturscaffold_70253890 Terpenoid MVK low borderline
Aturscaffold_90332970 Terpenoid MVK low borderline
Aturscaffold_70221390 Terpenoid PMK medium pass
Aturscaffold_80275350 Terpenoid TPS medium pass
Aturscaffold_80311800 Terpenoid TPS medium pass