PlantSME Plant secondary metabolism enzyme database

Aulacomnium turgidum (aulacomnium_turgidum)

Imported from atlas release summary for Aulacomnium turgidum.

973
Candidate Protein Records
700
Pathway-Level Records
1843
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 183 11 POD (96) View species results
Terpenoid pathway 156 19 BAHD (65) View species results
Alkaloid pathway 155 18 NMT (35) View species results
Flavonoid pathway 90 9 CHS (22) View species results
Rosmarinic acid pathway 80 7 C4H (35) View species results
Steroid pathway 36 13 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 719 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 125 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Aturscaffold_70223560 Alkaloid NMT low borderline
Aturscaffold_70223730 Alkaloid NMT medium pass
Aturscaffold_70223800 Alkaloid NMT low borderline
Aturscaffold_70224080 Alkaloid NMT low borderline
Aturscaffold_70224550 Alkaloid NMT medium pass
Aturscaffold_70224910 Alkaloid NMT medium pass
Aturscaffold_70227970 Alkaloid NMT low borderline
Aturscaffold_70236470 Alkaloid NMT medium pass
Aturscaffold_70244600 Alkaloid NMT medium borderline
Aturscaffold_70264520 Alkaloid NMT medium pass
Aturscaffold_80270260 Alkaloid NMT medium pass
Aturscaffold_80273880 Alkaloid NMT medium pass
Aturscaffold_80275440 Alkaloid NMT medium borderline
Aturscaffold_80276990 Alkaloid NMT low borderline
Aturscaffold_80277800 Alkaloid NMT low borderline
Aturscaffold_80283120 Alkaloid NMT low borderline
Aturscaffold_80297230 Alkaloid NMT low borderline
Aturscaffold_80297860 Alkaloid NMT medium pass
Aturscaffold_80299020 Alkaloid NMT low borderline
Aturscaffold_80302580 Alkaloid NMT medium pass
Aturscaffold_80305100 Alkaloid NMT low borderline
Aturscaffold_90312850 Alkaloid NMT low borderline
Aturscaffold_90313610 Alkaloid NMT medium pass
Aturscaffold_90315110 Alkaloid NMT low borderline
Aturscaffold_90319690 Alkaloid NMT medium pass
Aturscaffold_90320080 Alkaloid NMT low borderline
Aturscaffold_90320270 Alkaloid NMT medium pass
Aturscaffold_90322780 Alkaloid NMT medium pass
Aturscaffold_90323100 Alkaloid NMT low borderline
Aturscaffold_90328680 Alkaloid NMT low borderline
Aturscaffold_90329920 Alkaloid NMT low borderline
Aturscaffold_90331970 Alkaloid NMT low borderline
Aturscaffold_90333430 Alkaloid NMT medium borderline
Aturscaffold_10008740 Alkaloid PMT medium borderline
Aturscaffold_10017130 Alkaloid PMT low borderline
Aturscaffold_70242570 Alkaloid PMT low borderline
Aturscaffold_70251660 Alkaloid PMT medium pass
Aturscaffold_70251700 Alkaloid PMT low borderline
Aturscaffold_90329570 Alkaloid PMT medium pass
Aturscaffold_100040340 Alkaloid PYKS low borderline
Aturscaffold_10020770 Alkaloid PYKS low borderline
Aturscaffold_20079200 Alkaloid PYKS medium pass
Aturscaffold_20079210 Alkaloid PYKS medium pass
Aturscaffold_20080410 Alkaloid PYKS low borderline
Aturscaffold_20095990 Alkaloid PYKS low borderline
Aturscaffold_30103010 Alkaloid PYKS low borderline
Aturscaffold_40132460 Alkaloid PYKS high pass
Aturscaffold_40132470 Alkaloid PYKS high pass
Aturscaffold_40151700 Alkaloid PYKS high pass
Aturscaffold_40151720 Alkaloid PYKS high pass