PlantSME Plant secondary metabolism enzyme database

Callicarpa americana (callicarpa_americana)

Imported from atlas release summary for Callicarpa americana.

3128
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 19 BAHD (410) View species results
Alkaloid pathway 642 24 7DLGT (114) View species results
Phenylpropanoid pathway 589 13 POD (215) View species results
Flavonoid pathway 360 12 UFGT (248) View species results
Rosmarinic acid pathway 290 7 C4H (148) View species results
Steroid pathway 279 12 CAS (115) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3238 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 607 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DFR
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Gene Pathway Family Confidence Status
CAame01G0009770 Flavonoid DFR low borderline
CAame02G0023810 Flavonoid DFR medium borderline
CAame02G0023820 Flavonoid DFR medium borderline
CAame02G0023830 Flavonoid DFR medium borderline
CAame04G0000240 Flavonoid DFR medium borderline
CAame04G0000260 Flavonoid DFR medium borderline
CAame04G0000270 Flavonoid DFR medium borderline
CAame04G0027150 Flavonoid DFR medium pass
CAame05G0036650 Flavonoid DFR medium borderline
CAame05G0036660 Flavonoid DFR medium borderline
CAame06G0013980 Flavonoid DFR medium borderline
CAame06G0045520 Flavonoid DFR medium borderline
CAame06G0045670 Flavonoid DFR medium borderline
CAame08G0010670 Flavonoid DFR medium borderline
CAame08G0020330 Flavonoid DFR medium pass
CAame11G0029640 Flavonoid DFR medium borderline
CAame11G0029650 Flavonoid DFR low borderline
CAame12G0011150 Flavonoid DFR low borderline
CAame16G0017320 Flavonoid DFR medium borderline
CAame17G0004850 Flavonoid DFR medium borderline