PlantSME Plant secondary metabolism enzyme database

Callicarpa americana (callicarpa_americana)

Imported from atlas release summary for Callicarpa americana.

3128
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 19 BAHD (410) View species results
Alkaloid pathway 642 24 7DLGT (114) View species results
Phenylpropanoid pathway 589 13 POD (215) View species results
Flavonoid pathway 360 12 UFGT (248) View species results
Rosmarinic acid pathway 290 7 C4H (148) View species results
Steroid pathway 279 12 CAS (115) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3238 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 607 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
CAame01G0006410 Alkaloid PYKS high pass
CAame01G0006420 Alkaloid PYKS high pass
CAame01G0006430 Alkaloid PYKS high pass
CAame01G0038700 Alkaloid PYKS low borderline
CAame01G0045380 Alkaloid PYKS low borderline
CAame02G0004520 Alkaloid PYKS high pass
CAame02G0016580 Alkaloid PYKS low borderline
CAame02G0023860 Alkaloid PYKS low borderline
CAame02G0023870 Alkaloid PYKS low borderline
CAame03G0032150 Alkaloid PYKS low borderline
CAame04G0003620 Alkaloid PYKS high pass
CAame04G0005220 Alkaloid PYKS low borderline
CAame04G0016720 Alkaloid PYKS low borderline
CAame04G0031240 Alkaloid PYKS low borderline
CAame04G0039650 Alkaloid PYKS high pass
CAame06G0003180 Alkaloid PYKS low borderline
CAame06G0022090 Alkaloid PYKS low borderline
CAame06G0032690 Alkaloid PYKS low borderline
CAame06G0032700 Alkaloid PYKS low borderline
CAame06G0041700 Alkaloid PYKS low borderline
CAame06G0044390 Alkaloid PYKS medium pass
CAame07G0031370 Alkaloid PYKS low borderline
CAame08G0002590 Alkaloid PYKS low borderline
CAame08G0030310 Alkaloid PYKS low borderline
CAame10G0016320 Alkaloid PYKS low borderline
CAame10G0017140 Alkaloid PYKS low borderline
CAame11G0018820 Alkaloid PYKS low borderline
CAame11G0018830 Alkaloid PYKS low borderline
CAame11G0028010 Alkaloid PYKS low borderline
CAame11G0028020 Alkaloid PYKS low borderline
CAame14G0003570 Alkaloid PYKS low borderline
CAame14G0032570 Alkaloid PYKS low borderline
CAame15G0023160 Alkaloid PYKS low borderline
CAame15G0023170 Alkaloid PYKS low borderline
CAame16G0012280 Alkaloid PYKS low borderline
CAame17G0027680 Alkaloid PYKS low borderline
CAamescaffold_1030000350 Alkaloid PYKS high pass
CAamescaffold_1310000580 Alkaloid PYKS medium pass