PlantSME Plant secondary metabolism enzyme database

Callicarpa americana (callicarpa_americana)

Imported from atlas release summary for Callicarpa americana.

3128
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 19 BAHD (410) View species results
Alkaloid pathway 642 24 7DLGT (114) View species results
Phenylpropanoid pathway 589 13 POD (215) View species results
Flavonoid pathway 360 12 UFGT (248) View species results
Rosmarinic acid pathway 290 7 C4H (148) View species results
Steroid pathway 279 12 CAS (115) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3238 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 607 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NCS
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Gene Pathway Family Confidence Status Best Target
CAame01G0005170 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame01G0007460 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame01G0007470 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame01G0007490 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame01G0041300 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame02G0006640 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0006650 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0006660 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0006670 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0006680 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0006690 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0006700 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0006710 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0006720 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0006730 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0006800 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0006860 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0017140 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0017160 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame02G0025830 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame03G0020250 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame03G0020260 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame03G0020270 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame03G0034790 Alkaloid NCS low borderline NCS__00005__sp_Q67A25_NCS_THLFG
CAame05G0016100 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame05G0016110 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame06G0015980 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame06G0015990 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame10G0012390 Alkaloid NCS low borderline NCS__00005__sp_Q67A25_NCS_THLFG
CAame12G0025200 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame13G0006690 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
CAame13G0006710 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
CAame13G0012180 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame13G0023760 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame14G0018840 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame14G0018850 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame14G0018860 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame14G0018870 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
CAame14G0018890 Alkaloid NCS medium pass NCS__00004__sp_Q4QTJ2_NCS1_PAPSO
CAame16G0023380 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame16G0023390 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
CAame16G0024750 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA