PlantSME Plant secondary metabolism enzyme database

Callicarpa americana (callicarpa_americana)

Imported from atlas release summary for Callicarpa americana.

3128
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 19 BAHD (410) View species results
Alkaloid pathway 642 24 7DLGT (114) View species results
Phenylpropanoid pathway 589 13 POD (215) View species results
Flavonoid pathway 360 12 UFGT (248) View species results
Rosmarinic acid pathway 290 7 C4H (148) View species results
Steroid pathway 279 12 CAS (115) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3238 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 607 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SQS/FDFT1
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Gene Pathway Family Confidence Status
CAame01G0048870 Steroid SQS/FDFT1 low borderline
CAame01G0048880 Steroid SQS/FDFT1 medium pass
CAame01G0048890 Steroid SQS/FDFT1 medium pass
CAame01G0048900 Steroid SQS/FDFT1 low borderline
CAame01G0048910 Steroid SQS/FDFT1 medium pass
CAame01G0048920 Steroid SQS/FDFT1 medium pass
CAame01G0048930 Steroid SQS/FDFT1 medium pass
CAame04G0004090 Steroid SQS/FDFT1 high pass
CAame04G0004100 Steroid SQS/FDFT1 high pass
CAame06G0002410 Steroid SQS/FDFT1 high pass
CAame06G0002420 Steroid SQS/FDFT1 high pass
CAame06G0002430 Steroid SQS/FDFT1 high pass
CAame06G0002440 Steroid SQS/FDFT1 high pass
CAame06G0039580 Steroid SQS/FDFT1 low borderline
CAame06G0039590 Steroid SQS/FDFT1 low borderline
CAame06G0039600 Steroid SQS/FDFT1 low borderline
CAame06G0039610 Steroid SQS/FDFT1 low borderline
CAame06G0039620 Steroid SQS/FDFT1 low borderline
CAame08G0002790 Steroid SQS/FDFT1 medium pass
CAame08G0002800 Steroid SQS/FDFT1 low borderline
CAame08G0039290 Steroid SQS/FDFT1 medium pass