PlantSME Plant secondary metabolism enzyme database

Callicarpa americana (callicarpa_americana)

Imported from atlas release summary for Callicarpa americana.

3128
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 19 BAHD (410) View species results
Alkaloid pathway 642 24 7DLGT (114) View species results
Phenylpropanoid pathway 589 13 POD (215) View species results
Flavonoid pathway 360 12 UFGT (248) View species results
Rosmarinic acid pathway 290 7 C4H (148) View species results
Steroid pathway 279 12 CAS (115) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3238 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 607 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DXS
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Gene Pathway Family Confidence Status Best Target
CAame01G0012260 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame01G0012270 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame01G0012280 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame01G0012290 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame01G0012300 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame02G0014310 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame02G0014320 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame02G0014330 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame02G0014340 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame02G0014350 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame03G0032780 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame03G0032790 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame03G0032800 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame03G0032810 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame03G0032820 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame03G0032830 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame07G0030590 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame07G0030600 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame08G0005970 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame08G0005980 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame10G0004210 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH
CAame16G0012660 Terpenoid DXS medium pass DXS__00001__sp_Q38854_DXS_ARATH