Callicarpa americana (callicarpa_americana)
Imported from atlas release summary for Callicarpa americana.
3857
Candidate Protein Records
3128
Pathway-Level Records
8071
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
8071
Family-Level Calls
C4H
6.8%
BAHD
6.15%
C3'H/CYP98A
6.11%
IFS
4.26%
CYP76
3.68%
T3O
3.58%
UGT
3.54%
UFGT
3.27%
Other Families
62.61%
More Families (97)
4CL
264
3.27%
7DLGT
262
3.25%
NMT
228
2.82%
POD
220
2.73%
DWF4/CYP90B1
215
2.66%
F3H
199
2.47%
STR
172
2.13%
CAD
162
2.01%
F3'H/CYP75B
158
1.96%
BR6OX2/CYP85A2
132
1.64%
SMT1/SMT2/SMT3
131
1.62%
CAS
130
1.61%
CYP71
128
1.59%
H6H
116
1.44%
TPS
110
1.36%
GES
103
1.28%
IFR
99
1.23%
CODM/T6ODM
93
1.15%
ANR
92
1.14%
CYP90D1
89
1.1%
7DLH
87
1.08%
SGD
81
1.0%
LAC
73
0.9%
T16H
67
0.83%
TRI/TRII
66
0.82%
COMT
66
0.82%
HCT
63
0.78%
GS
59
0.73%
SLS
57
0.71%
BBE
53
0.66%
CSE
53
0.66%
CPD/CYP90A1
51
0.63%
IO
50
0.62%
G8O/G8H
49
0.61%
PMT
49
0.61%
CCR
48
0.59%
RAS
48
0.59%
FNS
46
0.57%
NCS
42
0.52%
F3'5'H/CYP75A
41
0.51%
PYKS
38
0.47%
16OMT
37
0.46%
8HGO
37
0.46%
F5H/CYP84A
37
0.46%
TAT
37
0.46%
CYP51G1
37
0.46%
BR6OX1/CYP85A1
34
0.42%
FPPS
34
0.42%
LAMT
31
0.38%
CCoAOMT
29
0.36%
AACT
29
0.36%
COR
27
0.33%
CNMT
26
0.32%
CPR
24
0.3%
SQE
24
0.3%
DXS
22
0.27%
SQS/FDFT1
21
0.26%
DFR
20
0.25%
MPO
18
0.22%
PAL
18
0.22%
GGPPS
18
0.22%
CYP80B1
16
0.2%
ANS/LDOX
15
0.19%
ISY
14
0.17%
SMO1/SMO2
13
0.16%
CHS
12
0.15%
ROT3/CYP90C1
9
0.11%
TDC
8
0.1%
TYDC_DDC
8
0.1%
HPPR
8
0.1%
6OMT_4OMT_SOMT
7
0.09%
DET2
7
0.09%
HMGR
7
0.09%
CHI
6
0.07%
MVD
6
0.07%
CYP719
5
0.06%
MVK
5
0.06%
CYP80F1
4
0.05%
MDS/IspF
4
0.05%
PMK
4
0.05%
HDR/IspH
4
0.05%
MCT/IspD
4
0.05%
DXR
4
0.05%
HDS/IspG
4
0.05%
CPI1
3
0.04%
FK
3
0.04%
HMGS
3
0.04%
GPPS
3
0.04%
IDI
3
0.04%
ADC
2
0.02%
XMT_MXMT_DXMT
2
0.02%
DWF7
2
0.02%
DWF1
2
0.02%
HYD1
2
0.02%
CMK/IspE
2
0.02%
FLS
1
0.01%
DWF5
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 968 | 19 | BAHD (410) | View species results |
| Alkaloid pathway | 642 | 24 | 7DLGT (114) | View species results |
| Phenylpropanoid pathway | 589 | 13 | POD (215) | View species results |
| Flavonoid pathway | 360 | 12 | UFGT (248) | View species results |
| Rosmarinic acid pathway | 290 | 7 | C4H (148) | View species results |
| Steroid pathway | 279 | 12 | CAS (115) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 3238 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 607 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| CAame01G0000290 | Flavonoid | IFS | medium | borderline |
| CAame01G0000310 | Flavonoid | IFS | medium | borderline |
| CAame01G0001240 | Flavonoid | IFS | medium | borderline |
| CAame01G0001250 | Flavonoid | IFS | medium | borderline |
| CAame01G0001260 | Flavonoid | IFS | medium | borderline |
| CAame01G0018010 | Flavonoid | IFS | medium | borderline |
| CAame01G0018190 | Flavonoid | IFS | medium | borderline |
| CAame01G0018200 | Flavonoid | IFS | medium | borderline |
| CAame01G0018250 | Flavonoid | IFS | medium | borderline |
| CAame01G0018550 | Flavonoid | IFS | medium | borderline |
| CAame01G0018560 | Flavonoid | IFS | medium | borderline |
| CAame01G0018610 | Flavonoid | IFS | medium | borderline |
| CAame01G0021990 | Flavonoid | IFS | low | borderline |
| CAame01G0022000 | Flavonoid | IFS | low | borderline |
| CAame01G0022860 | Flavonoid | IFS | low | borderline |
| CAame01G0023380 | Flavonoid | IFS | low | borderline |
| CAame01G0024730 | Flavonoid | IFS | medium | borderline |
| CAame01G0024770 | Flavonoid | IFS | medium | borderline |
| CAame01G0024920 | Flavonoid | IFS | medium | borderline |
| CAame01G0024930 | Flavonoid | IFS | medium | borderline |
| CAame01G0024940 | Flavonoid | IFS | medium | borderline |
| CAame01G0024970 | Flavonoid | IFS | medium | borderline |
| CAame01G0024980 | Flavonoid | IFS | medium | borderline |
| CAame01G0025000 | Flavonoid | IFS | medium | borderline |
| CAame01G0025010 | Flavonoid | IFS | medium | borderline |
| CAame01G0025020 | Flavonoid | IFS | medium | borderline |
| CAame01G0025030 | Flavonoid | IFS | medium | borderline |
| CAame01G0025040 | Flavonoid | IFS | medium | borderline |
| CAame01G0025320 | Flavonoid | IFS | low | borderline |
| CAame01G0025490 | Flavonoid | IFS | low | borderline |
| CAame01G0025500 | Flavonoid | IFS | low | borderline |
| CAame01G0036510 | Flavonoid | IFS | medium | borderline |
| CAame01G0036520 | Flavonoid | IFS | medium | borderline |
| CAame01G0036530 | Flavonoid | IFS | medium | borderline |
| CAame01G0045660 | Flavonoid | IFS | low | borderline |
| CAame01G0047530 | Flavonoid | IFS | medium | borderline |
| CAame02G0000750 | Flavonoid | IFS | medium | borderline |
| CAame02G0007140 | Flavonoid | IFS | medium | borderline |
| CAame02G0007150 | Flavonoid | IFS | medium | borderline |
| CAame02G0008390 | Flavonoid | IFS | medium | borderline |
| CAame02G0009630 | Flavonoid | IFS | medium | borderline |
| CAame02G0020470 | Flavonoid | IFS | medium | borderline |
| CAame02G0020520 | Flavonoid | IFS | medium | borderline |
| CAame02G0020550 | Flavonoid | IFS | medium | borderline |
| CAame02G0020560 | Flavonoid | IFS | medium | borderline |
| CAame02G0020630 | Flavonoid | IFS | medium | borderline |
| CAame02G0020650 | Flavonoid | IFS | medium | borderline |
| CAame02G0020670 | Flavonoid | IFS | medium | borderline |
| CAame02G0020680 | Flavonoid | IFS | medium | borderline |
| CAame02G0020690 | Flavonoid | IFS | medium | borderline |