PlantSME Plant secondary metabolism enzyme database

Callicarpa americana (callicarpa_americana)

Imported from atlas release summary for Callicarpa americana.

3128
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 19 BAHD (410) View species results
Alkaloid pathway 642 24 7DLGT (114) View species results
Phenylpropanoid pathway 589 13 POD (215) View species results
Flavonoid pathway 360 12 UFGT (248) View species results
Rosmarinic acid pathway 290 7 C4H (148) View species results
Steroid pathway 279 12 CAS (115) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3238 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 607 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
CAame05G0013490 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame05G0013500 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame05G0013510 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame05G0013520 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame05G0013530 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame05G0025700 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame05G0025710 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame05G0025720 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame05G0025730 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame05G0025740 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame05G0025750 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame05G0025760 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame05G0025770 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame05G0025780 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame05G0025790 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame05G0025800 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame05G0025810 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame05G0030200 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
CAame05G0030210 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
CAame05G0030220 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
CAame05G0030450 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
CAame05G0030460 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
CAame06G0000900 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
CAame06G0034300 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
CAame06G0034310 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
CAame06G0034320 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
CAame06G0034330 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
CAame06G0034340 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
CAame06G0035480 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame06G0035490 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame06G0038790 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
CAame06G0048940 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
CAame06G0048950 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
CAame06G0048960 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
CAame06G0048970 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
CAame06G0048980 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
CAame06G0048990 Alkaloid NMT medium pass NMT__00035__sp_Q6K431_TRX1_ORYSJ
CAame07G0001710 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame07G0001720 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame07G0001730 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame07G0001740 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame07G0001750 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame07G0001760 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame07G0013510 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
CAame07G0013520 Alkaloid NMT medium borderline NMT__00001__sp_A0A075D654_ANMT_RAUSE
CAame07G0017540 Alkaloid NMT low borderline NMT__00054__sp_Q9FF80_SUVH1_ARATH
CAame07G0020050 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
CAame07G0020060 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
CAame07G0029550 Alkaloid NMT low borderline NMT__00040__sp_Q84WW6_ASHH1_ARATH
CAame07G0029560 Alkaloid NMT low borderline NMT__00040__sp_Q84WW6_ASHH1_ARATH