PlantSME Plant secondary metabolism enzyme database

Callicarpa americana (callicarpa_americana)

Imported from atlas release summary for Callicarpa americana.

3128
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 19 BAHD (410) View species results
Alkaloid pathway 642 24 7DLGT (114) View species results
Phenylpropanoid pathway 589 13 POD (215) View species results
Flavonoid pathway 360 12 UFGT (248) View species results
Rosmarinic acid pathway 290 7 C4H (148) View species results
Steroid pathway 279 12 CAS (115) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3238 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 607 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
CAame09G0026670 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
CAame09G0026680 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
CAame09G0026690 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
CAame09G0026700 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
CAame10G0006780 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
CAame10G0006790 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
CAame10G0006800 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
CAame10G0006810 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
CAame10G0006850 Alkaloid NMT low borderline NMT__00023__sp_O82210_ANM12_ARATH
CAame10G0008960 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
CAame10G0008970 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
CAame10G0009000 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
CAame10G0009010 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
CAame10G0009020 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
CAame10G0015370 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
CAame10G0015380 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
CAame10G0015390 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
CAame11G0005120 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
CAame11G0005130 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
CAame11G0005140 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
CAame11G0007970 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame11G0007980 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame11G0007990 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame11G0008000 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame11G0008010 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame11G0008020 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame11G0008030 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame11G0008040 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
CAame11G0019340 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
CAame11G0019350 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
CAame11G0030020 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
CAame11G0030030 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
CAame12G0009620 Alkaloid NMT low borderline NMT__00019__sp_O22781_SUVH2_ARATH
CAame12G0009630 Alkaloid NMT low borderline NMT__00019__sp_O22781_SUVH2_ARATH
CAame12G0011180 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
CAame13G0010220 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
CAame13G0018380 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
CAame13G0018390 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
CAame13G0018400 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
CAame14G0008180 Alkaloid NMT medium pass NMT__00030__sp_Q43088_RBCMT_PEA
CAame14G0018050 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
CAame14G0018060 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
CAame14G0018110 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
CAame14G0018120 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
CAame14G0018140 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
CAame14G0018170 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
CAame15G0017370 Alkaloid NMT medium borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame15G0017380 Alkaloid NMT medium borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame15G0017390 Alkaloid NMT medium borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
CAame15G0017400 Alkaloid NMT medium borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH