PlantSME Plant secondary metabolism enzyme database

Callicarpa americana (callicarpa_americana)

Imported from atlas release summary for Callicarpa americana.

3857
Candidate Protein Records
3128
Pathway-Level Records
8071
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 968 19 BAHD (410) View species results
Alkaloid pathway 642 24 7DLGT (114) View species results
Phenylpropanoid pathway 589 13 POD (215) View species results
Flavonoid pathway 360 12 UFGT (248) View species results
Rosmarinic acid pathway 290 7 C4H (148) View species results
Steroid pathway 279 12 CAS (115) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3238 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 607 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
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Protein/Isoform Record Pathway Family Confidence Status Best Target
CAame13G0014970 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
CAame13G0015080 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame14G0004430 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame14G0004440 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame14G0032770 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
CAame14G0034600 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame15G0000720 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame15G0020440 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame15G0020450 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame16G0002280 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame16G0005390 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame16G0027630 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame16G0031820 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame17G0001380 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
CAame17G0001390 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame17G0001400 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame17G0010240 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame17G0021950 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR
CAame17G0024170 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame17G0024180 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAame17G0025860 Alkaloid STR low borderline STR__00001__sp_D3GE74_STR1_MEDTR
CAamescaffold_770003820 Alkaloid STR medium pass STR__00001__sp_D3GE74_STR1_MEDTR