PlantSME Plant secondary metabolism enzyme database

Callicarpa americana (callicarpa_americana)

Imported from atlas release summary for Callicarpa americana.

3128
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 19 BAHD (410) View species results
Alkaloid pathway 642 24 7DLGT (114) View species results
Phenylpropanoid pathway 589 13 POD (215) View species results
Flavonoid pathway 360 12 UFGT (248) View species results
Rosmarinic acid pathway 290 7 C4H (148) View species results
Steroid pathway 279 12 CAS (115) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3238 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 607 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
CAame02G0020680 Alkaloid T3O medium borderline
CAame02G0020690 Alkaloid T3O medium borderline
CAame02G0020810 Alkaloid T3O medium borderline
CAame02G0021270 Alkaloid T3O medium borderline
CAame02G0021290 Alkaloid T3O medium borderline
CAame02G0021300 Alkaloid T3O medium borderline
CAame02G0024070 Alkaloid T3O low borderline
CAame03G0008520 Alkaloid T3O medium pass
CAame03G0009810 Alkaloid T3O low borderline
CAame03G0016640 Alkaloid T3O medium pass
CAame03G0022690 Alkaloid T3O medium borderline
CAame03G0023730 Alkaloid T3O medium borderline
CAame03G0023780 Alkaloid T3O medium borderline
CAame03G0024310 Alkaloid T3O medium pass
CAame03G0030120 Alkaloid T3O medium pass
CAame03G0030160 Alkaloid T3O medium pass
CAame03G0030170 Alkaloid T3O low borderline
CAame03G0030180 Alkaloid T3O medium pass
CAame03G0032010 Alkaloid T3O medium borderline
CAame04G0006230 Alkaloid T3O medium pass
CAame04G0006240 Alkaloid T3O low borderline
CAame04G0006250 Alkaloid T3O medium pass
CAame04G0006260 Alkaloid T3O medium pass
CAame04G0037350 Alkaloid T3O medium borderline
CAame04G0037380 Alkaloid T3O medium borderline
CAame04G0037430 Alkaloid T3O medium borderline
CAame04G0037440 Alkaloid T3O medium borderline
CAame04G0042430 Alkaloid T3O low borderline
CAame05G0005940 Alkaloid T3O low borderline
CAame05G0022060 Alkaloid T3O low borderline
CAame05G0022090 Alkaloid T3O low borderline
CAame05G0022100 Alkaloid T3O low borderline
CAame05G0022110 Alkaloid T3O low borderline
CAame05G0022120 Alkaloid T3O low borderline
CAame05G0027440 Alkaloid T3O medium borderline
CAame05G0027450 Alkaloid T3O medium borderline
CAame05G0027480 Alkaloid T3O medium borderline
CAame05G0028920 Alkaloid T3O medium borderline
CAame05G0030060 Alkaloid T3O medium borderline
CAame05G0035390 Alkaloid T3O medium pass
CAame05G0035400 Alkaloid T3O low borderline
CAame05G0035410 Alkaloid T3O medium pass
CAame05G0045740 Alkaloid T3O medium borderline
CAame05G0045790 Alkaloid T3O medium borderline
CAame05G0045800 Alkaloid T3O medium borderline
CAame06G0002370 Alkaloid T3O medium borderline
CAame06G0014680 Alkaloid T3O medium borderline
CAame06G0014700 Alkaloid T3O medium borderline
CAame06G0018230 Alkaloid T3O medium pass
CAame06G0026930 Alkaloid T3O medium borderline